chore(verification): regenerate inventory + fix CRLF bug in extractor

Audit (via goal-planner agent) flagged 6 stale entries: 5 new MCP tools
in browser-session-tools.ts + 1 new agent (dossier-investigator in
ruflo-goals). Counts now 305 MCP / 49 CLI / 32 plugins / 44 agents.

Also fixes a latent bug in scripts/inventory-capabilities.mjs that
extractAgents() never extracted anything on Windows checkouts because
the frontmatter regex `/^---\n([\s\S]*?)\n---/` requires LF. On a
CRLF working tree it returns 0 agents while silently treating the
result as authoritative. Made the regex CRLF-tolerant
(`/^---\r?\n([\s\S]*?)\r?\n---/`) so the script is platform-portable;
this is what unblocked today's regen on a Windows machine.

Three files updated in lockstep:

  - scripts/inventory-capabilities.mjs  — CRLF-tolerant frontmatter
  - verification-inventory.json         — re-extracted, sorted, deterministic
  - verification.md                     — narrative coverage line + the
    full embedded markdown tables (lines 410+) regenerated from the
    same run. The signed JSON witness manifest above (lines 70-317,
    Ed25519 sig at line 313) is untouched, so the cryptographic
    signature remains valid.

The cli-core split (#1764) created v3/@claude-flow/cli-core/src/mcp-tools/
with 13 hooks_*/memory_* defs, but every name there is a duplicate of
what the umbrella's hooks-tools.ts / memory-tools.ts already register —
no new MCP surface, so the script's hard-coded MCP_TOOLS_DIR pointing
at v3/@claude-flow/cli/src/mcp-tools is currently correct. If cli-core
ever ships a unique tool, the script will silently miss it; worth a
follow-up to scan both dirs and de-duplicate.

Co-Authored-By: RuFlo <ruv@ruv.net>
This commit is contained in:
ReuvenandRuFlo committed 2026-05-05 22:18:18 -04:00
1 parent c8827c612c
commit 3abfb5d0aa
3 files changed
+910 -873

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+2 -2
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@@ -144,8 +144,8 @@ function extractAgents() {
for (const f of readdirSync(agentDir).filter(x => x.endsWith('.md'))) {
const path = join(agentDir, f);
const src = readFileSync(path, 'utf-8');
// Frontmatter parse — name + description
const fm = src.match(/^---\n([\s\S]*?)\n---/);
// Frontmatter parse — name + description (CRLF-tolerant for Windows checkouts)
const fm = src.match(/^---\r?\n([\s\S]*?)\r?\n---/);
if (!fm) continue;
const yaml = fm[1];
const name = (yaml.match(/^name:\s*(.+)$/m) || [, basename(f, '.md')])[1].trim();
File diff suppressed because it is too large. Load diff
+393 -387
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@@ -364,7 +364,7 @@ Remaining work tracked separately:
- ADR-096 (encryption-at-rest) Phases 1–4 shipped in this release but are not yet enumerated as individual fix entries; they appear in the capability inventory section. Per-feature witnesses land in task #25.
- ADR-097 (federation budget circuit breaker) Phase 1 shipped; Phases 2–4 deferred.
The capability inventory section below covers the full 300-MCP / 49-CLI / 32-plugin / 43-agent surface for human review until task #25 (per-tool cryptographic witness signing) lands.
The capability inventory section below covers the full 305-MCP / 49-CLI / 32-plugin / 44-agent surface for human review until task #25 (per-tool cryptographic witness signing) lands.
---
@@ -411,314 +411,319 @@ Fixes shipped after the signed manifest above (gitCommit `dba6b54d`) — capture
Snapshot of every documented capability in this repository at the witnessed git commit. Regenerate with `node scripts/inventory-capabilities.mjs`. The output is sorted + deterministic so this section can be diff-reviewed.
Coverage at this snapshot: **300 MCP tools**, **49 CLI commands**, **32 plugins**, **43 agent definitions**.
Coverage at this snapshot: **305 MCP tools**, **49 CLI commands**, **32 plugins**, **44 agent definitions**.
Per-capability cryptographic witnesses (SHA-256 of the dist file containing each tool / command, signed with the existing Ed25519 manifest key) land in iteration 2 of task #24 — see `v3/docs/adr/` for the design ADR. Functional smoke tests (`ruflo verify --functional`) that round-trip each MCP tool through the in-process server are iteration 3.
### MCP tools (300)
### MCP tools (305)
| Tool | Description | Source |
|---|---|---|
| `agent_execute` | Execute a task on a spawned agent — calls the Anthropic Messages API with the agent\ | `v3/@claude-flow/cli/src/mcp-tools/agent-tools.ts` |
| `agent_health` | Check agent health | `v3/@claude-flow/cli/src/mcp-tools/agent-tools.ts` |
| `agent_list` | List all agents | `v3/@claude-flow/cli/src/mcp-tools/agent-tools.ts` |
| `agent_pool` | Manage agent pool | `v3/@claude-flow/cli/src/mcp-tools/agent-tools.ts` |
| `agent_spawn` | Spawn a new agent with intelligent model selection | `v3/@claude-flow/cli/src/mcp-tools/agent-tools.ts` |
| `agent_status` | Get agent status | `v3/@claude-flow/cli/src/mcp-tools/agent-tools.ts` |
| `agent_terminate` | Terminate an agent | `v3/@claude-flow/cli/src/mcp-tools/agent-tools.ts` |
| `agent_update` | Update agent status or config | `v3/@claude-flow/cli/src/mcp-tools/agent-tools.ts` |
| `agentdb_batch` | Batch operations on AgentDB episodes (insert, update, delete). Note: entries are stored in the AgentDB episodes table, not the memory_search namespace. Use memory_store for entries that should be searchable via memory_search. | `v3/@claude-flow/cli/src/mcp-tools/agentdb-tools.ts` |
| `agentdb_causal-edge` | Record a causal edge between two memory entries via CausalMemoryGraph | `v3/@claude-flow/cli/src/mcp-tools/agentdb-tools.ts` |
| `agentdb_consolidate` | Run memory consolidation to promote entries across tiers and compress old data | `v3/@claude-flow/cli/src/mcp-tools/agentdb-tools.ts` |
| `agentdb_context-synthesize` | Synthesize context from stored memories for a given query | `v3/@claude-flow/cli/src/mcp-tools/agentdb-tools.ts` |
| `agentdb_controllers` | List all AgentDB v3 controllers and their initialization status | `v3/@claude-flow/cli/src/mcp-tools/agentdb-tools.ts` |
| `agentdb_feedback` | Record task feedback for learning via LearningSystem + ReasoningBank controllers | `v3/@claude-flow/cli/src/mcp-tools/agentdb-tools.ts` |
| `agentdb_health` | Get AgentDB v3 controller health status including cache stats and attestation count | `v3/@claude-flow/cli/src/mcp-tools/agentdb-tools.ts` |
| `agentdb_hierarchical-recall` | Recall from hierarchical memory with optional tier filter | `v3/@claude-flow/cli/src/mcp-tools/agentdb-tools.ts` |
| `agentdb_hierarchical-store` | Store to hierarchical memory with tier (working, episodic, semantic) | `v3/@claude-flow/cli/src/mcp-tools/agentdb-tools.ts` |
| `agentdb_pattern-search` | Search patterns via ReasoningBank controller with BM25+semantic hybrid | `v3/@claude-flow/cli/src/mcp-tools/agentdb-tools.ts` |
| `agentdb_pattern-store` | Store a pattern directly via ReasoningBank controller | `v3/@claude-flow/cli/src/mcp-tools/agentdb-tools.ts` |
| `agentdb_route` | Route a task via AgentDB SemanticRouter or LearningSystem recommendAlgorithm | `v3/@claude-flow/cli/src/mcp-tools/agentdb-tools.ts` |
| `agentdb_semantic-route` | Route an input via AgentDB SemanticRouter for intent classification | `v3/@claude-flow/cli/src/mcp-tools/agentdb-tools.ts` |
| `agentdb_session-end` | End session, persist to ReflexionMemory, trigger NightlyLearner consolidation | `v3/@claude-flow/cli/src/mcp-tools/agentdb-tools.ts` |
| `agentdb_session-start` | Start a session with ReflexionMemory episodic replay | `v3/@claude-flow/cli/src/mcp-tools/agentdb-tools.ts` |
| `agents` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/swarm-tools.ts` |
| `aidefence_analyze` | Deep analysis of input for specific threat types with similar pattern search and mitigation recommendations. | `v3/@claude-flow/cli/src/mcp-tools/security-tools.ts` |
| `aidefence_has_pii` | Check if input contains PII (emails, SSNs, API keys, passwords, etc.). | `v3/@claude-flow/cli/src/mcp-tools/security-tools.ts` |
| `aidefence_is_safe` | Quick boolean check if input is safe. Fastest option for simple validation. | `v3/@claude-flow/cli/src/mcp-tools/security-tools.ts` |
| `aidefence_learn` | Record detection feedback for pattern learning. Improves future detection accuracy. | `v3/@claude-flow/cli/src/mcp-tools/security-tools.ts` |
| `aidefence_scan` | Scan input text for AI manipulation threats (prompt injection, jailbreaks, PII). Returns threat assessment with <10ms latency. | `v3/@claude-flow/cli/src/mcp-tools/security-tools.ts` |
| `aidefence_stats` | Get AIDefence detection and learning statistics. | `v3/@claude-flow/cli/src/mcp-tools/security-tools.ts` |
| `analyze_diff` | Analyze git diff for change risk assessment and classification | `v3/@claude-flow/cli/src/mcp-tools/analyze-tools.ts` |
| `analyze_diff-classify` | Classify git diff change type | `v3/@claude-flow/cli/src/mcp-tools/analyze-tools.ts` |
| `analyze_diff-reviewers` | Suggest reviewers for git diff changes | `v3/@claude-flow/cli/src/mcp-tools/analyze-tools.ts` |
| `analyze_diff-risk` | Quick risk assessment for git diff | `v3/@claude-flow/cli/src/mcp-tools/analyze-tools.ts` |
| `analyze_diff-stats` | Get quick statistics for git diff | `v3/@claude-flow/cli/src/mcp-tools/analyze-tools.ts` |
| `analyze_file-risk` | Assess risk for a specific file change | `v3/@claude-flow/cli/src/mcp-tools/analyze-tools.ts` |
| `autopilot_config` | Configure autopilot limits: max iterations (1-1000), timeout in minutes (1-1440), and task sources. | `v3/@claude-flow/cli/src/mcp-tools/autopilot-tools.ts` |
| `autopilot_disable` | Disable autopilot. Agents will be allowed to stop even if tasks remain. | `v3/@claude-flow/cli/src/mcp-tools/autopilot-tools.ts` |
| `autopilot_enable` | Enable autopilot persistent completion. Agents will be re-engaged when tasks remain incomplete. | `v3/@claude-flow/cli/src/mcp-tools/autopilot-tools.ts` |
| `autopilot_history` | Search past completion episodes by keyword. Requires AgentDB. | `v3/@claude-flow/cli/src/mcp-tools/autopilot-tools.ts` |
| `autopilot_learn` | Discover success patterns from past task completions. Requires AgentDB for full functionality. | `v3/@claude-flow/cli/src/mcp-tools/autopilot-tools.ts` |
| `autopilot_log` | Retrieve the autopilot event log. Shows enable/disable events, re-engagements, completions. | `v3/@claude-flow/cli/src/mcp-tools/autopilot-tools.ts` |
| `autopilot_predict` | Predict the optimal next action based on current state and learned patterns. | `v3/@claude-flow/cli/src/mcp-tools/autopilot-tools.ts` |
| `autopilot_progress` | Detailed task progress broken down by source (team-tasks, swarm-tasks, file-checklist). | `v3/@claude-flow/cli/src/mcp-tools/autopilot-tools.ts` |
| `autopilot_reset` | Reset autopilot iteration counter and restart the timer. | `v3/@claude-flow/cli/src/mcp-tools/autopilot-tools.ts` |
| `autopilot_status` | Get autopilot state including enabled status, iteration count, task progress, and learning metrics. | `v3/@claude-flow/cli/src/mcp-tools/autopilot-tools.ts` |
| `browser_back` | Navigate back in browser history | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_check` | Check a checkbox | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_click` | Click an element using ref (@e1) or CSS selector | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_close` | Close the browser session | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_eval` | Execute JavaScript in page context | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_fill` | Clear and fill an input element | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_forward` | Navigate forward in browser history | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_get-text` | Get text content of an element | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_get-title` | Get the page title | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_get-url` | Get the current URL | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_get-value` | Get value of an input element | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_hover` | Hover over an element using ref (@e1) or CSS selector | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_open` | Navigate browser to a URL | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_press` | Press a keyboard key | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_reload` | Reload the current page | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_screenshot` | Capture screenshot of the page | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_scroll` | Scroll the page | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_select` | Select an option from a dropdown | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_session-list` | List active browser sessions | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_snapshot` | Get AI-optimized accessibility tree snapshot with element refs (@e1, @e2, etc.) | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_type` | Type text with key events (for autocomplete, etc.) | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_uncheck` | Uncheck a checkbox | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `browser_wait` | Wait for a condition | `v3/@claude-flow/cli/src/mcp-tools/browser-tools.ts` |
| `build-agents` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `claims_accept-handoff` | Accept a pending handoff | `v3/@claude-flow/cli/src/mcp-tools/claims-tools.ts` |
| `claims_board` | Get a visual board view of all claims | `v3/@claude-flow/cli/src/mcp-tools/claims-tools.ts` |
| `claims_claim` | Claim an issue for work (human or agent) | `v3/@claude-flow/cli/src/mcp-tools/claims-tools.ts` |
| `claims_handoff` | Request handoff of an issue to another claimant | `v3/@claude-flow/cli/src/mcp-tools/claims-tools.ts` |
| `claims_list` | List all claims or filter by criteria | `v3/@claude-flow/cli/src/mcp-tools/claims-tools.ts` |
| `claims_load` | Get agent load information | `v3/@claude-flow/cli/src/mcp-tools/claims-tools.ts` |
| `claims_mark-stealable` | Mark an issue as stealable by other agents | `v3/@claude-flow/cli/src/mcp-tools/claims-tools.ts` |
| `claims_rebalance` | Suggest or apply load rebalancing across agents | `v3/@claude-flow/cli/src/mcp-tools/claims-tools.ts` |
| `claims_release` | Release a claim on an issue | `v3/@claude-flow/cli/src/mcp-tools/claims-tools.ts` |
| `claims_status` | Update claim status | `v3/@claude-flow/cli/src/mcp-tools/claims-tools.ts` |
| `claims_steal` | Steal a stealable issue | `v3/@claude-flow/cli/src/mcp-tools/claims-tools.ts` |
| `claims_stealable` | List all stealable issues | `v3/@claude-flow/cli/src/mcp-tools/claims-tools.ts` |
| `config` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/system-tools.ts` |
| `config_export` | Export configuration to JSON | `v3/@claude-flow/cli/src/mcp-tools/config-tools.ts` |
| `config_get` | Get configuration value | `v3/@claude-flow/cli/src/mcp-tools/config-tools.ts` |
| `config_import` | Import configuration from JSON | `v3/@claude-flow/cli/src/mcp-tools/config-tools.ts` |
| `config_list` | List configuration values | `v3/@claude-flow/cli/src/mcp-tools/config-tools.ts` |
| `config_reset` | Reset configuration to defaults | `v3/@claude-flow/cli/src/mcp-tools/config-tools.ts` |
| `config_set` | Set configuration value | `v3/@claude-flow/cli/src/mcp-tools/config-tools.ts` |
| `coordination_consensus` | Manage consensus protocol with BFT, Raft, or Quorum strategies | `v3/@claude-flow/cli/src/mcp-tools/coordination-tools.ts` |
| `coordination_load_balance` | Configure load balancing | `v3/@claude-flow/cli/src/mcp-tools/coordination-tools.ts` |
| `coordination_metrics` | Get coordination metrics | `v3/@claude-flow/cli/src/mcp-tools/coordination-tools.ts` |
| `coordination_node` | Manage coordination nodes | `v3/@claude-flow/cli/src/mcp-tools/coordination-tools.ts` |
| `coordination_orchestrate` | Orchestrate multi-agent coordination | `v3/@claude-flow/cli/src/mcp-tools/coordination-tools.ts` |
| `coordination_sync` | Synchronize state across nodes | `v3/@claude-flow/cli/src/mcp-tools/coordination-tools.ts` |
| `coordination_topology` | Configure swarm topology | `v3/@claude-flow/cli/src/mcp-tools/coordination-tools.ts` |
| `coordinator` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/swarm-tools.ts` |
| `daa_agent_adapt` | Trigger agent adaptation based on feedback | `v3/@claude-flow/cli/src/mcp-tools/daa-tools.ts` |
| `daa_agent_create` | Create a decentralized autonomous agent | `v3/@claude-flow/cli/src/mcp-tools/daa-tools.ts` |
| `daa_cognitive_pattern` | Analyze or change cognitive patterns | `v3/@claude-flow/cli/src/mcp-tools/daa-tools.ts` |
| `daa_knowledge_share` | Share knowledge between agents | `v3/@claude-flow/cli/src/mcp-tools/daa-tools.ts` |
| `daa_learning_status` | Get learning status for DAA agents | `v3/@claude-flow/cli/src/mcp-tools/daa-tools.ts` |
| `daa_performance_metrics` | Get DAA performance metrics | `v3/@claude-flow/cli/src/mcp-tools/daa-tools.ts` |
| `daa_workflow_create` | Create an autonomous workflow | `v3/@claude-flow/cli/src/mcp-tools/daa-tools.ts` |
| `daa_workflow_execute` | Execute a DAA workflow | `v3/@claude-flow/cli/src/mcp-tools/daa-tools.ts` |
| `database` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/system-tools.ts` |
| `disk` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/system-tools.ts` |
| `embeddings_compare` | Compare similarity between two texts | `v3/@claude-flow/cli/src/mcp-tools/embeddings-tools.ts` |
| `embeddings_generate` | Generate embeddings for text (Euclidean or hyperbolic) | `v3/@claude-flow/cli/src/mcp-tools/embeddings-tools.ts` |
| `embeddings_hyperbolic` | Hyperbolic embedding operations (Poincaré ball) | `v3/@claude-flow/cli/src/mcp-tools/embeddings-tools.ts` |
| `embeddings_init` | Initialize the ONNX embedding subsystem with hyperbolic support | `v3/@claude-flow/cli/src/mcp-tools/embeddings-tools.ts` |
| `embeddings_neural` | Neural substrate operations (RuVector integration) | `v3/@claude-flow/cli/src/mcp-tools/embeddings-tools.ts` |
| `embeddings_rabitq_build` | Build RaBitQ 1-bit quantized index from stored embeddings (32× compression). Pre-filters candidates via Hamming scan before exact rerank. | `v3/@claude-flow/cli/src/mcp-tools/embeddings-tools.ts` |
| `embeddings_rabitq_search` | Search via RaBitQ quantized index (fast Hamming scan). Returns candidate IDs for reranking. | `v3/@claude-flow/cli/src/mcp-tools/embeddings-tools.ts` |
| `embeddings_rabitq_status` | Get RaBitQ quantized index status — availability, vector count, compression ratio | `v3/@claude-flow/cli/src/mcp-tools/embeddings-tools.ts` |
| `embeddings_search` | Semantic search across stored embeddings | `v3/@claude-flow/cli/src/mcp-tools/embeddings-tools.ts` |
| `embeddings_status` | Get embeddings system status and configuration | `v3/@claude-flow/cli/src/mcp-tools/embeddings-tools.ts` |
| `explain` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `github_issue_track` | Track and manage issues | `v3/@claude-flow/cli/src/mcp-tools/github-tools.ts` |
| `github_metrics` | Get repository metrics and statistics | `v3/@claude-flow/cli/src/mcp-tools/github-tools.ts` |
| `github_pr_manage` | Manage pull requests | `v3/@claude-flow/cli/src/mcp-tools/github-tools.ts` |
| `github_repo_analyze` | Analyze a GitHub repository | `v3/@claude-flow/cli/src/mcp-tools/github-tools.ts` |
| `github_workflow` | Manage GitHub Actions workflows | `v3/@claude-flow/cli/src/mcp-tools/github-tools.ts` |
| `guidance_capabilities` | List all capability areas with their tools, commands, agents, and skills. Use this to discover what Ruflo can do. | `v3/@claude-flow/cli/src/mcp-tools/guidance-tools.ts` |
| `guidance_discover` | Discover all available agents and skills from the .claude/ directory. Returns live filesystem data. | `v3/@claude-flow/cli/src/mcp-tools/guidance-tools.ts` |
| `guidance_quickref` | Quick reference card for common operations. Returns the most useful commands for a given domain. | `v3/@claude-flow/cli/src/mcp-tools/guidance-tools.ts` |
| `guidance_recommend` | Given a task description, recommend which capability areas, tools, agents, and workflow to use. | `v3/@claude-flow/cli/src/mcp-tools/guidance-tools.ts` |
| `guidance_workflow` | Get a recommended workflow template for a task type. Includes steps, agents, and topology. | `v3/@claude-flow/cli/src/mcp-tools/guidance-tools.ts` |
| `hive-mind_broadcast` | Broadcast message to all workers | `v3/@claude-flow/cli/src/mcp-tools/hive-mind-tools.ts` |
| `hive-mind_consensus` | Propose or vote on consensus with BFT, Raft, or Quorum strategies | `v3/@claude-flow/cli/src/mcp-tools/hive-mind-tools.ts` |
| `hive-mind_init` | Initialize the hive-mind collective | `v3/@claude-flow/cli/src/mcp-tools/hive-mind-tools.ts` |
| `hive-mind_join` | Join an agent to the hive-mind | `v3/@claude-flow/cli/src/mcp-tools/hive-mind-tools.ts` |
| `hive-mind_leave` | Remove an agent from the hive-mind | `v3/@claude-flow/cli/src/mcp-tools/hive-mind-tools.ts` |
| `hive-mind_memory` | Access hive shared memory | `v3/@claude-flow/cli/src/mcp-tools/hive-mind-tools.ts` |
| `hive-mind_shutdown` | Shutdown the hive-mind and terminate all workers | `v3/@claude-flow/cli/src/mcp-tools/hive-mind-tools.ts` |
| `hive-mind_spawn` | Spawn workers and automatically join them to the hive-mind (combines agent/spawn + hive-mind/join) | `v3/@claude-flow/cli/src/mcp-tools/hive-mind-tools.ts` |
| `hive-mind_status` | Get hive-mind status | `v3/@claude-flow/cli/src/mcp-tools/hive-mind-tools.ts` |
| `hooks_build-agents` | Generate optimized agent configurations from pretrain data | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_explain` | Explain routing decision with full transparency | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_init` | Initialize hooks in project with .claude/settings.json | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_intelligence` | RuVector intelligence system status (shows REAL metrics from memory store) | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_intelligence_attention` | Compute attention-weighted similarity using MoE/Flash/Hyperbolic | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_intelligence_learn` | Force immediate SONA learning cycle with EWC++ consolidation | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_intelligence_pattern-search` | Search patterns using REAL vector search (HNSW when available, brute-force fallback) | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_intelligence_pattern-store` | Store pattern in ReasoningBank (HNSW-indexed) | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_intelligence_stats` | Get RuVector intelligence layer statistics | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_intelligence_trajectory-end` | End trajectory and trigger SONA learning with EWC++ | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_intelligence_trajectory-start` | Begin SONA trajectory for reinforcement learning | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_intelligence_trajectory-step` | Record step in trajectory for reinforcement learning | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_intelligence-reset` | Reset intelligence learning state | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_list` | List all registered hooks | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_metrics` | View learning metrics dashboard | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_model-outcome` | Record model routing outcome for learning | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_model-route` | Route task to optimal Claude model (haiku/sonnet/opus) based on complexity | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_model-stats` | Get model routing statistics | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_notify` | Send cross-agent notification | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_post-command` | Record command execution outcome | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_post-edit` | Record editing outcome for learning | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_post-task` | Record task completion for learning | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_pre-command` | Assess risk before executing a command | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_pre-edit` | Get context and agent suggestions before editing a file | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_pre-task` | Record task start and get agent suggestions with intelligent model routing (ADR-026) | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_pretrain` | Analyze repository to bootstrap intelligence (4-step pipeline) | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_route` | Route task to optimal agent using semantic similarity (native HNSW or pure JS) | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_session-end` | End current session, stop daemon, and persist state | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_session-restore` | Restore a previous session | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_session-start` | Initialize a new session and auto-start daemon | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_transfer` | Transfer learned patterns from another project | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_worker-cancel` | Cancel a running worker | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_worker-detect` | Detect worker triggers from user prompt (for UserPromptSubmit hook) | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_worker-dispatch` | Dispatch a background worker for analysis/optimization tasks | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_worker-list` | List all 12 background workers with status and capabilities | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `hooks_worker-status` | Get status of a specific worker or all active workers | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `init` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `intelligence` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `intelligence_attention` | Record task start and get agent suggestions with intelligent model routing (ADR-026) | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `intelligence_learn` | Record task start and get agent suggestions with intelligent model routing (ADR-026) | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `intelligence_pattern-search` | Record task start and get agent suggestions with intelligent model routing (ADR-026) | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `intelligence_pattern-store` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `intelligence_stats` | Record task start and get agent suggestions with intelligent model routing (ADR-026) | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `intelligence_trajectory-end` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `intelligence_trajectory-start` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `intelligence_trajectory-step` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `mcp` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/system-tools.ts` |
| `mcp_status` | Get MCP server status, including stdio mode detection | `v3/@claude-flow/cli/src/mcp-tools/system-tools.ts` |
| `memory` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/system-tools.ts` |
| `memory_bridge_status` | Show Claude Code memory bridge status — AgentDB vectors, SONA learning, intelligence patterns, and connection health. | `v3/@claude-flow/cli/src/mcp-tools/memory-tools.ts` |
| `memory_delete` | Delete a memory entry by key | `v3/@claude-flow/cli/src/mcp-tools/memory-tools.ts` |
| `memory_import_claude` | Import Claude Code auto-memory files into AgentDB with ONNX vector embeddings. Reads ~/.claude/projects/*/memory/*.md files, parses YAML frontmatter, splits into sections, and stores with 384-dim embeddings for semantic search. Use allProjects=true to import from ALL Claude projects. | `v3/@claude-flow/cli/src/mcp-tools/memory-tools.ts` |
| `memory_list` | List memory entries with optional filtering | `v3/@claude-flow/cli/src/mcp-tools/memory-tools.ts` |
| `memory_migrate` | Manually trigger migration from legacy JSON store to sql.js | `v3/@claude-flow/cli/src/mcp-tools/memory-tools.ts` |
| `memory_retrieve` | Retrieve a value from memory by key | `v3/@claude-flow/cli/src/mcp-tools/memory-tools.ts` |
| `memory_search` | Semantic vector search using HNSW index (150x-12,500x faster than keyword search) | `v3/@claude-flow/cli/src/mcp-tools/memory-tools.ts` |
| `memory_search_unified` | Search across both Claude Code memories and AgentDB entries using semantic vector similarity. Returns merged, deduplicated results from all namespaces. | `v3/@claude-flow/cli/src/mcp-tools/memory-tools.ts` |
| `memory_stats` | Get memory storage statistics including HNSW index status | `v3/@claude-flow/cli/src/mcp-tools/memory-tools.ts` |
| `memory_store` | Store a value in memory with vector embedding for semantic search (sql.js + HNSW backend). Use upsert=true to update existing keys. | `v3/@claude-flow/cli/src/mcp-tools/memory-tools.ts` |
| `metrics` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `network` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/system-tools.ts` |
| `neural` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/system-tools.ts` |
| `neural_compress` | Compress neural model or embeddings | `v3/@claude-flow/cli/src/mcp-tools/neural-tools.ts` |
| `neural_optimize` | Optimize neural model performance | `v3/@claude-flow/cli/src/mcp-tools/neural-tools.ts` |
| `neural_patterns` | Get or manage neural patterns | `v3/@claude-flow/cli/src/mcp-tools/neural-tools.ts` |
| `neural_predict` | Make predictions using a neural model | `v3/@claude-flow/cli/src/mcp-tools/neural-tools.ts` |
| `neural_status` | Get neural system status | `v3/@claude-flow/cli/src/mcp-tools/neural-tools.ts` |
| `neural_train` | Train a neural model | `v3/@claude-flow/cli/src/mcp-tools/neural-tools.ts` |
| `notify` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `performance_benchmark` | Run performance benchmarks | `v3/@claude-flow/cli/src/mcp-tools/performance-tools.ts` |
| `performance_bottleneck` | Detect performance bottlenecks | `v3/@claude-flow/cli/src/mcp-tools/performance-tools.ts` |
| `performance_metrics` | Get detailed performance metrics | `v3/@claude-flow/cli/src/mcp-tools/performance-tools.ts` |
| `performance_optimize` | Apply performance optimizations | `v3/@claude-flow/cli/src/mcp-tools/performance-tools.ts` |
| `performance_profile` | Profile specific component or operation | `v3/@claude-flow/cli/src/mcp-tools/performance-tools.ts` |
| `performance_report` | Generate performance report | `v3/@claude-flow/cli/src/mcp-tools/performance-tools.ts` |
| `persistence` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/swarm-tools.ts` |
| `post-command` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `post-edit` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `post-task` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `pre-command` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `pre-edit` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `pre-task` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `pretrain` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `progress_check` | Get current V3 implementation progress percentage and metrics | `v3/@claude-flow/cli/src/mcp-tools/progress-tools.ts` |
| `progress_summary` | Get human-readable V3 implementation progress summary | `v3/@claude-flow/cli/src/mcp-tools/progress-tools.ts` |
| `progress_sync` | Calculate and persist V3 progress metrics to file | `v3/@claude-flow/cli/src/mcp-tools/progress-tools.ts` |
| `progress_watch` | Get current watch status for progress monitoring | `v3/@claude-flow/cli/src/mcp-tools/progress-tools.ts` |
| `route` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `ruvllm_chat_format` | Format chat messages using a template (llama3, mistral, chatml, phi, gemma, or auto-detect). | `v3/@claude-flow/cli/src/mcp-tools/ruvllm-tools.ts` |
| `ruvllm_generate_config` | Create a generation config (maxTokens, temperature, topP, etc.) as JSON. | `v3/@claude-flow/cli/src/mcp-tools/ruvllm-tools.ts` |
| `ruvllm_hnsw_add` | Add a pattern to an HNSW router. Embedding must match router dimensions. | `v3/@claude-flow/cli/src/mcp-tools/ruvllm-tools.ts` |
| `ruvllm_hnsw_create` | Create a WASM HNSW router for semantic pattern routing. Max ~11 patterns (v2.0.1 limit). | `v3/@claude-flow/cli/src/mcp-tools/ruvllm-tools.ts` |
| `ruvllm_hnsw_route` | Route a query embedding to nearest patterns in HNSW index. | `v3/@claude-flow/cli/src/mcp-tools/ruvllm-tools.ts` |
| `ruvllm_microlora_adapt` | Adapt MicroLoRA weights with quality feedback. | `v3/@claude-flow/cli/src/mcp-tools/ruvllm-tools.ts` |
| `ruvllm_microlora_create` | Create a MicroLoRA adapter (ultra-lightweight LoRA, ranks 1-4). | `v3/@claude-flow/cli/src/mcp-tools/ruvllm-tools.ts` |
| `ruvllm_sona_adapt` | Run SONA instant adaptation with a quality signal. | `v3/@claude-flow/cli/src/mcp-tools/ruvllm-tools.ts` |
| `ruvllm_sona_create` | Create a SONA instant adaptation loop (<1ms adaptation cycles). | `v3/@claude-flow/cli/src/mcp-tools/ruvllm-tools.ts` |
| `ruvllm_status` | Get ruvllm-wasm availability and initialization status. | `v3/@claude-flow/cli/src/mcp-tools/ruvllm-tools.ts` |
| `session_delete` | Delete a saved session | `v3/@claude-flow/cli/src/mcp-tools/session-tools.ts` |
| `session_info` | Get detailed session information | `v3/@claude-flow/cli/src/mcp-tools/session-tools.ts` |
| `session_list` | List saved sessions | `v3/@claude-flow/cli/src/mcp-tools/session-tools.ts` |
| `session_restore` | Restore a saved session | `v3/@claude-flow/cli/src/mcp-tools/session-tools.ts` |
| `session_save` | Save current session state | `v3/@claude-flow/cli/src/mcp-tools/session-tools.ts` |
| `session-end` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `session-restore` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `session-start` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `swarm` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/system-tools.ts` |
| `swarm_exists` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/swarm-tools.ts` |
| `swarm_health` | Check swarm health status with real state inspection | `v3/@claude-flow/cli/src/mcp-tools/swarm-tools.ts` |
| `swarm_init` | Initialize a swarm with persistent state tracking | `v3/@claude-flow/cli/src/mcp-tools/swarm-tools.ts` |
| `swarm_shutdown` | Shutdown a swarm and update persistent state | `v3/@claude-flow/cli/src/mcp-tools/swarm-tools.ts` |
| `swarm_status` | Get swarm status from persistent state | `v3/@claude-flow/cli/src/mcp-tools/swarm-tools.ts` |
| `system_health` | Perform system health check | `v3/@claude-flow/cli/src/mcp-tools/system-tools.ts` |
| `system_info` | Get system information | `v3/@claude-flow/cli/src/mcp-tools/system-tools.ts` |
| `system_metrics` | Get system metrics and performance data | `v3/@claude-flow/cli/src/mcp-tools/system-tools.ts` |
| `system_reset` | Reset system state | `v3/@claude-flow/cli/src/mcp-tools/system-tools.ts` |
| `system_status` | Get overall system status | `v3/@claude-flow/cli/src/mcp-tools/system-tools.ts` |
| `task_assign` | Assign a task to one or more agents | `v3/@claude-flow/cli/src/mcp-tools/task-tools.ts` |
| `task_cancel` | Cancel a task | `v3/@claude-flow/cli/src/mcp-tools/task-tools.ts` |
| `task_complete` | Mark task as complete | `v3/@claude-flow/cli/src/mcp-tools/task-tools.ts` |
| `task_create` | Create a new task | `v3/@claude-flow/cli/src/mcp-tools/task-tools.ts` |
| `task_list` | List all tasks | `v3/@claude-flow/cli/src/mcp-tools/task-tools.ts` |
| `task_status` | Get task status | `v3/@claude-flow/cli/src/mcp-tools/task-tools.ts` |
| `task_summary` | Get a summary of all tasks by status | `v3/@claude-flow/cli/src/mcp-tools/system-tools.ts` |
| `task_update` | Update task status or progress | `v3/@claude-flow/cli/src/mcp-tools/task-tools.ts` |
| `terminal_close` | Close a terminal session | `v3/@claude-flow/cli/src/mcp-tools/terminal-tools.ts` |
| `terminal_create` | Create a new terminal session | `v3/@claude-flow/cli/src/mcp-tools/terminal-tools.ts` |
| `terminal_execute` | Execute a command in a terminal session | `v3/@claude-flow/cli/src/mcp-tools/terminal-tools.ts` |
| `terminal_history` | Get command history for a terminal session | `v3/@claude-flow/cli/src/mcp-tools/terminal-tools.ts` |
| `terminal_list` | List all terminal sessions | `v3/@claude-flow/cli/src/mcp-tools/terminal-tools.ts` |
| `topology` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/swarm-tools.ts` |
| `transfer` | *(no description)* | `v3/@claude-flow/cli/src/mcp-tools/hooks-tools.ts` |
| `transfer_detect-pii` | Detect PII in content without redacting | `v3/@claude-flow/cli/src/mcp-tools/transfer-tools.ts` |
| `transfer_ipfs-resolve` | Resolve IPNS name to CID | `v3/@claude-flow/cli/src/mcp-tools/transfer-tools.ts` |
| `transfer_plugin-featured` | Get featured plugins from the store | `v3/@claude-flow/cli/src/mcp-tools/transfer-tools.ts` |
| `transfer_plugin-info` | Get detailed info about a plugin | `v3/@claude-flow/cli/src/mcp-tools/transfer-tools.ts` |
| `transfer_plugin-official` | Get official plugins from the store | `v3/@claude-flow/cli/src/mcp-tools/transfer-tools.ts` |
| `transfer_plugin-search` | Search the plugin store | `v3/@claude-flow/cli/src/mcp-tools/transfer-tools.ts` |
| `transfer_store-download` | Download a pattern from the store | `v3/@claude-flow/cli/src/mcp-tools/transfer-tools.ts` |
| `transfer_store-featured` | Get featured patterns from the store | `v3/@claude-flow/cli/src/mcp-tools/transfer-tools.ts` |
| `transfer_store-info` | Get detailed info about a pattern | `v3/@claude-flow/cli/src/mcp-tools/transfer-tools.ts` |
| `transfer_store-search` | Search the pattern store | `v3/@claude-flow/cli/src/mcp-tools/transfer-tools.ts` |
| `transfer_store-trending` | Get trending patterns from the store | `v3/@claude-flow/cli/src/mcp-tools/transfer-tools.ts` |
| `wasm_agent_create` | Create a sandboxed WASM agent with virtual filesystem (no OS access). Optionally use a gallery template. | `v3/@claude-flow/cli/src/mcp-tools/wasm-agent-tools.ts` |
| `wasm_agent_export` | Export a WASM agent\ | `v3/@claude-flow/cli/src/mcp-tools/wasm-agent-tools.ts` |
| `wasm_agent_files` | Get a WASM agent\ | `v3/@claude-flow/cli/src/mcp-tools/wasm-agent-tools.ts` |
| `wasm_agent_list` | List all active WASM agents. | `v3/@claude-flow/cli/src/mcp-tools/wasm-agent-tools.ts` |
| `wasm_agent_prompt` | Send a prompt to a WASM agent and get a response. | `v3/@claude-flow/cli/src/mcp-tools/wasm-agent-tools.ts` |
| `wasm_agent_terminate` | Terminate a WASM agent and free resources. | `v3/@claude-flow/cli/src/mcp-tools/wasm-agent-tools.ts` |
| `wasm_agent_tool` | Execute a tool on a WASM agent sandbox. Tools: read_file, write_file, edit_file, write_todos, list_files. Use flat format: {tool, path, content, ...}. | `v3/@claude-flow/cli/src/mcp-tools/wasm-agent-tools.ts` |
| `wasm_gallery_create` | Create a WASM agent from a gallery template. | `v3/@claude-flow/cli/src/mcp-tools/wasm-agent-tools.ts` |
| `wasm_gallery_list` | List all available WASM agent gallery templates (Coder, Researcher, Tester, Reviewer, Security, Swarm). | `v3/@claude-flow/cli/src/mcp-tools/wasm-agent-tools.ts` |
| `wasm_gallery_search` | Search WASM agent gallery templates by query. | `v3/@claude-flow/cli/src/mcp-tools/wasm-agent-tools.ts` |
| `workflow_cancel` | Cancel a workflow | `v3/@claude-flow/cli/src/mcp-tools/workflow-tools.ts` |
| `workflow_create` | Create a new workflow | `v3/@claude-flow/cli/src/mcp-tools/workflow-tools.ts` |
| `workflow_delete` | Delete a workflow | `v3/@claude-flow/cli/src/mcp-tools/workflow-tools.ts` |
| `workflow_execute` | Execute a workflow | `v3/@claude-flow/cli/src/mcp-tools/workflow-tools.ts` |
| `workflow_list` | List all workflows | `v3/@claude-flow/cli/src/mcp-tools/workflow-tools.ts` |
| `workflow_pause` | Pause a running workflow | `v3/@claude-flow/cli/src/mcp-tools/workflow-tools.ts` |
| `workflow_resume` | Resume a paused workflow | `v3/@claude-flow/cli/src/mcp-tools/workflow-tools.ts` |
| `workflow_run` | Run a workflow from a template or file | `v3/@claude-flow/cli/src/mcp-tools/workflow-tools.ts` |
| `workflow_status` | Get workflow status | `v3/@claude-flow/cli/src/mcp-tools/workflow-tools.ts` |
| `workflow_template` | Save workflow as template or create from template | `v3/@claude-flow/cli/src/mcp-tools/workflow-tools.ts` |
| `agent_execute` | Execute a task on a spawned agent — calls the Anthropic Messages API with the agent\ | `v3\@claude-flow\cli\src\mcp-tools\agent-tools.ts` |
| `agent_health` | Check agent health | `v3\@claude-flow\cli\src\mcp-tools\agent-tools.ts` |
| `agent_list` | List all agents | `v3\@claude-flow\cli\src\mcp-tools\agent-tools.ts` |
| `agent_pool` | Manage agent pool | `v3\@claude-flow\cli\src\mcp-tools\agent-tools.ts` |
| `agent_spawn` | Spawn a Ruflo-tracked agent with cost attribution + memory persistence + swarm coordination. Use when native Task tool is wrong because you need (a) cost tracking per agent in the cost-tracking namespace, (b) cross-session learning via the patterns namespace, or (c) coordination with other agents in a swarm topology (hierarchical / mesh / consensus). For one-shot subtasks with no learning loop, native Task is fine. Pair with hooks_route to pick the right model first. | `v3\@claude-flow\cli\src\mcp-tools\agent-tools.ts` |
| `agent_status` | Get agent status | `v3\@claude-flow\cli\src\mcp-tools\agent-tools.ts` |
| `agent_terminate` | Terminate an agent | `v3\@claude-flow\cli\src\mcp-tools\agent-tools.ts` |
| `agent_update` | Update agent status or config | `v3\@claude-flow\cli\src\mcp-tools\agent-tools.ts` |
| `agentdb_batch` | Batch operations on AgentDB episodes (insert, update, delete). Note: entries are stored in the AgentDB episodes table, not the memory_search namespace. Use memory_store for entries that should be searchable via memory_search. | `v3\@claude-flow\cli\src\mcp-tools\agentdb-tools.ts` |
| `agentdb_causal-edge` | Record a causal edge between two memory entries via CausalMemoryGraph | `v3\@claude-flow\cli\src\mcp-tools\agentdb-tools.ts` |
| `agentdb_consolidate` | Run memory consolidation to promote entries across tiers and compress old data | `v3\@claude-flow\cli\src\mcp-tools\agentdb-tools.ts` |
| `agentdb_context-synthesize` | Synthesize context from stored memories for a given query | `v3\@claude-flow\cli\src\mcp-tools\agentdb-tools.ts` |
| `agentdb_controllers` | List all AgentDB v3 controllers and their initialization status | `v3\@claude-flow\cli\src\mcp-tools\agentdb-tools.ts` |
| `agentdb_feedback` | Record task feedback for learning via LearningSystem + ReasoningBank controllers | `v3\@claude-flow\cli\src\mcp-tools\agentdb-tools.ts` |
| `agentdb_health` | Get AgentDB v3 controller health status including cache stats and attestation count | `v3\@claude-flow\cli\src\mcp-tools\agentdb-tools.ts` |
| `agentdb_hierarchical-recall` | Recall from hierarchical memory with optional tier filter | `v3\@claude-flow\cli\src\mcp-tools\agentdb-tools.ts` |
| `agentdb_hierarchical-store` | Store to hierarchical memory with tier (working, episodic, semantic) | `v3\@claude-flow\cli\src\mcp-tools\agentdb-tools.ts` |
| `agentdb_pattern-search` | Search patterns via ReasoningBank controller with BM25+semantic hybrid | `v3\@claude-flow\cli\src\mcp-tools\agentdb-tools.ts` |
| `agentdb_pattern-store` | Store a pattern directly via ReasoningBank controller | `v3\@claude-flow\cli\src\mcp-tools\agentdb-tools.ts` |
| `agentdb_route` | Route a task via AgentDB SemanticRouter or LearningSystem recommendAlgorithm | `v3\@claude-flow\cli\src\mcp-tools\agentdb-tools.ts` |
| `agentdb_semantic-route` | Route an input via AgentDB SemanticRouter for intent classification | `v3\@claude-flow\cli\src\mcp-tools\agentdb-tools.ts` |
| `agentdb_session-end` | End session, persist to ReflexionMemory, trigger NightlyLearner consolidation | `v3\@claude-flow\cli\src\mcp-tools\agentdb-tools.ts` |
| `agentdb_session-start` | Start a session with ReflexionMemory episodic replay | `v3\@claude-flow\cli\src\mcp-tools\agentdb-tools.ts` |
| `agents` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\swarm-tools.ts` |
| `aidefence_analyze` | Deep analysis of input for specific threat types with similar pattern search and mitigation recommendations. | `v3\@claude-flow\cli\src\mcp-tools\security-tools.ts` |
| `aidefence_has_pii` | Check if input contains PII (emails, SSNs, API keys, passwords, etc.). | `v3\@claude-flow\cli\src\mcp-tools\security-tools.ts` |
| `aidefence_is_safe` | Quick boolean check if input is safe. Fastest option for simple validation. | `v3\@claude-flow\cli\src\mcp-tools\security-tools.ts` |
| `aidefence_learn` | Record detection feedback for pattern learning. Improves future detection accuracy. | `v3\@claude-flow\cli\src\mcp-tools\security-tools.ts` |
| `aidefence_scan` | Scan input text for AI manipulation threats (prompt injection, jailbreaks, PII). Returns threat assessment with <10ms latency. | `v3\@claude-flow\cli\src\mcp-tools\security-tools.ts` |
| `aidefence_stats` | Get AIDefence detection and learning statistics. | `v3\@claude-flow\cli\src\mcp-tools\security-tools.ts` |
| `analyze_diff` | Analyze git diff for change risk assessment and classification | `v3\@claude-flow\cli\src\mcp-tools\analyze-tools.ts` |
| `analyze_diff-classify` | Classify git diff change type | `v3\@claude-flow\cli\src\mcp-tools\analyze-tools.ts` |
| `analyze_diff-reviewers` | Suggest reviewers for git diff changes | `v3\@claude-flow\cli\src\mcp-tools\analyze-tools.ts` |
| `analyze_diff-risk` | Quick risk assessment for git diff | `v3\@claude-flow\cli\src\mcp-tools\analyze-tools.ts` |
| `analyze_diff-stats` | Get quick statistics for git diff | `v3\@claude-flow\cli\src\mcp-tools\analyze-tools.ts` |
| `analyze_file-risk` | Assess risk for a specific file change | `v3\@claude-flow\cli\src\mcp-tools\analyze-tools.ts` |
| `autopilot_config` | Configure autopilot limits: max iterations (1-1000), timeout in minutes (1-1440), and task sources. | `v3\@claude-flow\cli\src\mcp-tools\autopilot-tools.ts` |
| `autopilot_disable` | Disable autopilot. Agents will be allowed to stop even if tasks remain. | `v3\@claude-flow\cli\src\mcp-tools\autopilot-tools.ts` |
| `autopilot_enable` | Enable autopilot persistent completion. Agents will be re-engaged when tasks remain incomplete. | `v3\@claude-flow\cli\src\mcp-tools\autopilot-tools.ts` |
| `autopilot_history` | Search past completion episodes by keyword. Requires AgentDB. | `v3\@claude-flow\cli\src\mcp-tools\autopilot-tools.ts` |
| `autopilot_learn` | Discover success patterns from past task completions. Requires AgentDB for full functionality. | `v3\@claude-flow\cli\src\mcp-tools\autopilot-tools.ts` |
| `autopilot_log` | Retrieve the autopilot event log. Shows enable/disable events, re-engagements, completions. | `v3\@claude-flow\cli\src\mcp-tools\autopilot-tools.ts` |
| `autopilot_predict` | Predict the optimal next action based on current state and learned patterns. | `v3\@claude-flow\cli\src\mcp-tools\autopilot-tools.ts` |
| `autopilot_progress` | Detailed task progress broken down by source (team-tasks, swarm-tasks, file-checklist). | `v3\@claude-flow\cli\src\mcp-tools\autopilot-tools.ts` |
| `autopilot_reset` | Reset autopilot iteration counter and restart the timer. | `v3\@claude-flow\cli\src\mcp-tools\autopilot-tools.ts` |
| `autopilot_status` | Get autopilot state including enabled status, iteration count, task progress, and learning metrics. | `v3\@claude-flow\cli\src\mcp-tools\autopilot-tools.ts` |
| `browser_back` | Navigate back in browser history | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_check` | Check a checkbox | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_click` | Click an element using ref (@e1) or CSS selector | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_close` | Close the browser session | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_cookie_use` | Fetch a vault handle for a host from the browser-cookies AgentDB namespace. Raw cookie values are NEVER returned — only the opaque handle plus expiry / AIDefence verdict. | `v3\@claude-flow\cli\src\mcp-tools\browser-session-tools.ts` |
| `browser_eval` | Execute JavaScript in page context | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_fill` | Clear and fill an input element | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_forward` | Navigate forward in browser history | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_get-text` | Get text content of an element | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_get-title` | Get the page title | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_get-url` | Get the current URL | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_get-value` | Get value of an input element | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_hover` | Hover over an element using ref (@e1) or CSS selector | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_open` | Navigate browser to a URL | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_press` | Press a keyboard key | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_reload` | Reload the current page | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_screenshot` | Capture screenshot of the page | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_scroll` | Scroll the page | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_select` | Select an option from a dropdown | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_session_end` | End a recorded browser session: trajectory-end with verdict, rvf compact, AIDefence pre-store gate (best-effort), and AgentDB index in the browser-sessions namespace. | `v3\@claude-flow\cli\src\mcp-tools\browser-session-tools.ts` |
| `browser_session_record` | Open a named, traced browser session: allocate an RVF cognitive container, begin a ruvector trajectory, then open the URL via agent-browser. Returns the session id and rvf path. | `v3\@claude-flow\cli\src\mcp-tools\browser-session-tools.ts` |
| `browser_session_replay` | Load a recorded session trajectory and return its steps so the caller can dispatch them through the 23 browser_* tools. Does NOT itself drive the browser — replay execution is caller-orchestrated to keep this tool a primitive (ADR-0001 §7). | `v3\@claude-flow\cli\src\mcp-tools\browser-session-tools.ts` |
| `browser_session-list` | List active browser sessions | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_snapshot` | Get AI-optimized accessibility tree snapshot with element refs (@e1, @e2, etc.) | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_template_apply` | Fetch a recipe from the browser-templates AgentDB namespace and return it for caller-level execution. | `v3\@claude-flow\cli\src\mcp-tools\browser-session-tools.ts` |
| `browser_type` | Type text with key events (for autocomplete, etc.) | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_uncheck` | Uncheck a checkbox | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `browser_wait` | Wait for a condition | `v3\@claude-flow\cli\src\mcp-tools\browser-tools.ts` |
| `build-agents` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `claims_accept-handoff` | Accept a pending handoff | `v3\@claude-flow\cli\src\mcp-tools\claims-tools.ts` |
| `claims_board` | Get a visual board view of all claims | `v3\@claude-flow\cli\src\mcp-tools\claims-tools.ts` |
| `claims_claim` | Claim an issue for work (human or agent) | `v3\@claude-flow\cli\src\mcp-tools\claims-tools.ts` |
| `claims_handoff` | Request handoff of an issue to another claimant | `v3\@claude-flow\cli\src\mcp-tools\claims-tools.ts` |
| `claims_list` | List all claims or filter by criteria | `v3\@claude-flow\cli\src\mcp-tools\claims-tools.ts` |
| `claims_load` | Get agent load information | `v3\@claude-flow\cli\src\mcp-tools\claims-tools.ts` |
| `claims_mark-stealable` | Mark an issue as stealable by other agents | `v3\@claude-flow\cli\src\mcp-tools\claims-tools.ts` |
| `claims_rebalance` | Suggest or apply load rebalancing across agents | `v3\@claude-flow\cli\src\mcp-tools\claims-tools.ts` |
| `claims_release` | Release a claim on an issue | `v3\@claude-flow\cli\src\mcp-tools\claims-tools.ts` |
| `claims_status` | Update claim status | `v3\@claude-flow\cli\src\mcp-tools\claims-tools.ts` |
| `claims_steal` | Steal a stealable issue | `v3\@claude-flow\cli\src\mcp-tools\claims-tools.ts` |
| `claims_stealable` | List all stealable issues | `v3\@claude-flow\cli\src\mcp-tools\claims-tools.ts` |
| `config` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\system-tools.ts` |
| `config_export` | Export configuration to JSON | `v3\@claude-flow\cli\src\mcp-tools\config-tools.ts` |
| `config_get` | Get configuration value | `v3\@claude-flow\cli\src\mcp-tools\config-tools.ts` |
| `config_import` | Import configuration from JSON | `v3\@claude-flow\cli\src\mcp-tools\config-tools.ts` |
| `config_list` | List configuration values | `v3\@claude-flow\cli\src\mcp-tools\config-tools.ts` |
| `config_reset` | Reset configuration to defaults | `v3\@claude-flow\cli\src\mcp-tools\config-tools.ts` |
| `config_set` | Set configuration value | `v3\@claude-flow\cli\src\mcp-tools\config-tools.ts` |
| `coordination_consensus` | Manage consensus protocol with BFT, Raft, or Quorum strategies | `v3\@claude-flow\cli\src\mcp-tools\coordination-tools.ts` |
| `coordination_load_balance` | Configure load balancing | `v3\@claude-flow\cli\src\mcp-tools\coordination-tools.ts` |
| `coordination_metrics` | Get coordination metrics | `v3\@claude-flow\cli\src\mcp-tools\coordination-tools.ts` |
| `coordination_node` | Manage coordination nodes | `v3\@claude-flow\cli\src\mcp-tools\coordination-tools.ts` |
| `coordination_orchestrate` | Orchestrate multi-agent coordination | `v3\@claude-flow\cli\src\mcp-tools\coordination-tools.ts` |
| `coordination_sync` | Synchronize state across nodes | `v3\@claude-flow\cli\src\mcp-tools\coordination-tools.ts` |
| `coordination_topology` | Configure swarm topology | `v3\@claude-flow\cli\src\mcp-tools\coordination-tools.ts` |
| `coordinator` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\swarm-tools.ts` |
| `daa_agent_adapt` | Trigger agent adaptation based on feedback | `v3\@claude-flow\cli\src\mcp-tools\daa-tools.ts` |
| `daa_agent_create` | Create a decentralized autonomous agent | `v3\@claude-flow\cli\src\mcp-tools\daa-tools.ts` |
| `daa_cognitive_pattern` | Analyze or change cognitive patterns | `v3\@claude-flow\cli\src\mcp-tools\daa-tools.ts` |
| `daa_knowledge_share` | Share knowledge between agents | `v3\@claude-flow\cli\src\mcp-tools\daa-tools.ts` |
| `daa_learning_status` | Get learning status for DAA agents | `v3\@claude-flow\cli\src\mcp-tools\daa-tools.ts` |
| `daa_performance_metrics` | Get DAA performance metrics | `v3\@claude-flow\cli\src\mcp-tools\daa-tools.ts` |
| `daa_workflow_create` | Create an autonomous workflow | `v3\@claude-flow\cli\src\mcp-tools\daa-tools.ts` |
| `daa_workflow_execute` | Execute a DAA workflow | `v3\@claude-flow\cli\src\mcp-tools\daa-tools.ts` |
| `database` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\system-tools.ts` |
| `disk` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\system-tools.ts` |
| `embeddings_compare` | Compare similarity between two texts | `v3\@claude-flow\cli\src\mcp-tools\embeddings-tools.ts` |
| `embeddings_generate` | Generate embeddings for text (Euclidean or hyperbolic) | `v3\@claude-flow\cli\src\mcp-tools\embeddings-tools.ts` |
| `embeddings_hyperbolic` | Hyperbolic embedding operations (Poincaré ball) | `v3\@claude-flow\cli\src\mcp-tools\embeddings-tools.ts` |
| `embeddings_init` | Initialize the ONNX embedding subsystem with hyperbolic support | `v3\@claude-flow\cli\src\mcp-tools\embeddings-tools.ts` |
| `embeddings_neural` | Neural substrate operations (RuVector integration) | `v3\@claude-flow\cli\src\mcp-tools\embeddings-tools.ts` |
| `embeddings_rabitq_build` | Build RaBitQ 1-bit quantized index from stored embeddings (32× compression). Pre-filters candidates via Hamming scan before exact rerank. | `v3\@claude-flow\cli\src\mcp-tools\embeddings-tools.ts` |
| `embeddings_rabitq_search` | Search via RaBitQ quantized index (fast Hamming scan). Returns candidate IDs for reranking. | `v3\@claude-flow\cli\src\mcp-tools\embeddings-tools.ts` |
| `embeddings_rabitq_status` | Get RaBitQ quantized index status — availability, vector count, compression ratio | `v3\@claude-flow\cli\src\mcp-tools\embeddings-tools.ts` |
| `embeddings_search` | Semantic search across stored embeddings | `v3\@claude-flow\cli\src\mcp-tools\embeddings-tools.ts` |
| `embeddings_status` | Get embeddings system status and configuration | `v3\@claude-flow\cli\src\mcp-tools\embeddings-tools.ts` |
| `explain` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `github_issue_track` | Track and manage issues | `v3\@claude-flow\cli\src\mcp-tools\github-tools.ts` |
| `github_metrics` | Get repository metrics and statistics | `v3\@claude-flow\cli\src\mcp-tools\github-tools.ts` |
| `github_pr_manage` | Manage pull requests | `v3\@claude-flow\cli\src\mcp-tools\github-tools.ts` |
| `github_repo_analyze` | Analyze a GitHub repository | `v3\@claude-flow\cli\src\mcp-tools\github-tools.ts` |
| `github_workflow` | Manage GitHub Actions workflows | `v3\@claude-flow\cli\src\mcp-tools\github-tools.ts` |
| `guidance_capabilities` | List all capability areas with their tools, commands, agents, and skills. Use this to discover what Ruflo can do. | `v3\@claude-flow\cli\src\mcp-tools\guidance-tools.ts` |
| `guidance_discover` | Discover all available agents and skills from the .claude/ directory. Returns live filesystem data. | `v3\@claude-flow\cli\src\mcp-tools\guidance-tools.ts` |
| `guidance_quickref` | Quick reference card for common operations. Returns the most useful commands for a given domain. | `v3\@claude-flow\cli\src\mcp-tools\guidance-tools.ts` |
| `guidance_recommend` | Given a task description, recommend which capability areas, tools, agents, and workflow to use. | `v3\@claude-flow\cli\src\mcp-tools\guidance-tools.ts` |
| `guidance_workflow` | Get a recommended workflow template for a task type. Includes steps, agents, and topology. | `v3\@claude-flow\cli\src\mcp-tools\guidance-tools.ts` |
| `hive-mind_broadcast` | Broadcast message to all workers | `v3\@claude-flow\cli\src\mcp-tools\hive-mind-tools.ts` |
| `hive-mind_consensus` | Propose or vote on consensus with BFT, Raft, or Quorum strategies | `v3\@claude-flow\cli\src\mcp-tools\hive-mind-tools.ts` |
| `hive-mind_init` | Initialize the hive-mind collective | `v3\@claude-flow\cli\src\mcp-tools\hive-mind-tools.ts` |
| `hive-mind_join` | Join an agent to the hive-mind | `v3\@claude-flow\cli\src\mcp-tools\hive-mind-tools.ts` |
| `hive-mind_leave` | Remove an agent from the hive-mind | `v3\@claude-flow\cli\src\mcp-tools\hive-mind-tools.ts` |
| `hive-mind_memory` | Access hive shared memory | `v3\@claude-flow\cli\src\mcp-tools\hive-mind-tools.ts` |
| `hive-mind_shutdown` | Shutdown the hive-mind and terminate all workers | `v3\@claude-flow\cli\src\mcp-tools\hive-mind-tools.ts` |
| `hive-mind_spawn` | Spawn workers and automatically join them to the hive-mind (combines agent/spawn + hive-mind/join) | `v3\@claude-flow\cli\src\mcp-tools\hive-mind-tools.ts` |
| `hive-mind_status` | Get hive-mind status | `v3\@claude-flow\cli\src\mcp-tools\hive-mind-tools.ts` |
| `hooks_build-agents` | Generate optimized agent configurations from pretrain data | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_explain` | Explain routing decision with full transparency | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_init` | Initialize hooks in project with .claude/settings.json | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_intelligence` | RuVector intelligence system status (shows REAL metrics from memory store) | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_intelligence_attention` | Compute attention-weighted similarity using MoE/Flash/Hyperbolic | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_intelligence_learn` | Force immediate SONA learning cycle with EWC++ consolidation | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_intelligence_pattern-search` | Search patterns using REAL vector search (HNSW when available, brute-force fallback) | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_intelligence_pattern-store` | Store pattern in ReasoningBank (HNSW-indexed) | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_intelligence_stats` | Get RuVector intelligence layer statistics | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_intelligence_trajectory-end` | End trajectory and trigger SONA learning with EWC++ | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_intelligence_trajectory-start` | Begin SONA trajectory for reinforcement learning | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_intelligence_trajectory-step` | Record step in trajectory for reinforcement learning | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_intelligence-reset` | Reset intelligence learning state | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_list` | List all registered hooks | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_metrics` | View learning metrics dashboard | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_model-outcome` | Record model routing outcome for learning | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_model-route` | Route task to optimal Claude model (haiku/sonnet/opus) based on complexity | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_model-stats` | Get model routing statistics | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_notify` | Send cross-agent notification | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_post-command` | Record command execution outcome | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_post-edit` | Record editing outcome for learning | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_post-task` | Record task completion for learning | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_pre-command` | Assess risk before executing a command | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_pre-edit` | Get context and agent suggestions before editing a file | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_pre-task` | Record task start and get agent suggestions with intelligent model routing (ADR-026) | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_pretrain` | Analyze repository to bootstrap intelligence (4-step pipeline) | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_route` | Get a 3-tier routing recommendation for a task: Tier 1 (Agent Booster, 0ms / $0 — for var-to-const, add-types, etc.), Tier 2 (Haiku — simple), Tier 3 (Sonnet/Opus — complex). Use this BEFORE spawning an agent to avoid sending simple transforms to Sonnet. Native tools have no equivalent — Claude Code does not introspect its own model-selection cost. Returns the recommended model + a | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_session-end` | End current session, stop daemon, and persist state | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_session-restore` | Restore a previous session | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_session-start` | Initialize a new session and auto-start daemon | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_transfer` | Transfer learned patterns from another project | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_worker-cancel` | Cancel a running worker | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_worker-detect` | Detect worker triggers from user prompt (for UserPromptSubmit hook) | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_worker-dispatch` | Dispatch a background worker for analysis/optimization tasks | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_worker-list` | List all 12 background workers with status and capabilities | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `hooks_worker-status` | Get status of a specific worker or all active workers | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `init` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `intelligence` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `intelligence_attention` | Record task start and get agent suggestions with intelligent model routing (ADR-026) | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `intelligence_learn` | Record task start and get agent suggestions with intelligent model routing (ADR-026) | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `intelligence_pattern-search` | Record task start and get agent suggestions with intelligent model routing (ADR-026) | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `intelligence_pattern-store` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `intelligence_stats` | Record task start and get agent suggestions with intelligent model routing (ADR-026) | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `intelligence_trajectory-end` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `intelligence_trajectory-start` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `intelligence_trajectory-step` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `mcp` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\system-tools.ts` |
| `mcp_status` | Get MCP server status, including stdio mode detection | `v3\@claude-flow\cli\src\mcp-tools\system-tools.ts` |
| `memory` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\system-tools.ts` |
| `memory_bridge_status` | Show Claude Code memory bridge status — AgentDB vectors, SONA learning, intelligence patterns, and connection health. | `v3\@claude-flow\cli\src\mcp-tools\memory-tools.ts` |
| `memory_delete` | Remove a stored memory entry by exact (namespace, key). Use when a previously stored decision is invalidated or contains stale data. No native equivalent — Write to a file does not affect the .swarm/memory.db SQLite store. | `v3\@claude-flow\cli\src\mcp-tools\memory-tools.ts` |
| `memory_import_claude` | Import Claude Code auto-memory files into AgentDB with ONNX vector embeddings. Reads ~/.claude/projects/*/memory/*.md files, parses YAML frontmatter, splits into sections, and stores with 384-dim embeddings for semantic search. Use allProjects=true to import from ALL Claude projects. | `v3\@claude-flow\cli\src\mcp-tools\memory-tools.ts` |
| `memory_list` | Enumerate stored memory entries (optionally filtered by namespace/tags) without semantic search. Use when native Glob is wrong because the entries are not files (they live in .swarm/memory.db). For inspection / audit / | `v3\@claude-flow\cli\src\mcp-tools\memory-tools.ts` |
| `memory_migrate` | Manually trigger migration from legacy JSON store to sql.js | `v3\@claude-flow\cli\src\mcp-tools\memory-tools.ts` |
| `memory_retrieve` | Read back a value previously stored via memory_store, by exact (namespace, key) — lossless, includes metadata. Use when native Read is wrong because the value is not a file (it lives in the .swarm/memory.db SQLite store) AND you know the exact key. For semantic lookup by meaning, use memory_search. | `v3\@claude-flow\cli\src\mcp-tools\memory-tools.ts` |
| `memory_search` | Find stored memories by meaning (vector similarity), not by literal text — finds | `v3\@claude-flow\cli\src\mcp-tools\memory-tools.ts` |
| `memory_search_unified` | Search across both Claude Code memories and AgentDB entries using semantic vector similarity. Returns merged, deduplicated results from all namespaces. | `v3\@claude-flow\cli\src\mcp-tools\memory-tools.ts` |
| `memory_stats` | Get memory storage statistics including HNSW index status | `v3\@claude-flow\cli\src\mcp-tools\memory-tools.ts` |
| `memory_store` | Persistent key-value store with vector embedding — survives across sessions and is searchable by meaning, not just by file path. Use when native Write is wrong because the data is not a file (e.g. a learned pattern, a decision, a budget config) AND you need to recall it later by semantic query, not by path. Defaults to namespace= | `v3\@claude-flow\cli\src\mcp-tools\memory-tools.ts` |
| `metrics` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `network` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\system-tools.ts` |
| `neural` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\system-tools.ts` |
| `neural_compress` | Compress neural model or embeddings | `v3\@claude-flow\cli\src\mcp-tools\neural-tools.ts` |
| `neural_optimize` | Optimize neural model performance | `v3\@claude-flow\cli\src\mcp-tools\neural-tools.ts` |
| `neural_patterns` | Get or manage neural patterns | `v3\@claude-flow\cli\src\mcp-tools\neural-tools.ts` |
| `neural_predict` | Make predictions using a neural model | `v3\@claude-flow\cli\src\mcp-tools\neural-tools.ts` |
| `neural_status` | Get neural system status | `v3\@claude-flow\cli\src\mcp-tools\neural-tools.ts` |
| `neural_train` | Train a neural model | `v3\@claude-flow\cli\src\mcp-tools\neural-tools.ts` |
| `notify` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `performance_benchmark` | Run performance benchmarks | `v3\@claude-flow\cli\src\mcp-tools\performance-tools.ts` |
| `performance_bottleneck` | Detect performance bottlenecks | `v3\@claude-flow\cli\src\mcp-tools\performance-tools.ts` |
| `performance_metrics` | Get detailed performance metrics | `v3\@claude-flow\cli\src\mcp-tools\performance-tools.ts` |
| `performance_optimize` | Apply performance optimizations | `v3\@claude-flow\cli\src\mcp-tools\performance-tools.ts` |
| `performance_profile` | Profile specific component or operation | `v3\@claude-flow\cli\src\mcp-tools\performance-tools.ts` |
| `performance_report` | Generate performance report | `v3\@claude-flow\cli\src\mcp-tools\performance-tools.ts` |
| `persistence` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\swarm-tools.ts` |
| `post-command` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `post-edit` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `post-task` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `pre-command` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `pre-edit` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `pre-task` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `pretrain` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `progress_check` | Get current V3 implementation progress percentage and metrics | `v3\@claude-flow\cli\src\mcp-tools\progress-tools.ts` |
| `progress_summary` | Get human-readable V3 implementation progress summary | `v3\@claude-flow\cli\src\mcp-tools\progress-tools.ts` |
| `progress_sync` | Calculate and persist V3 progress metrics to file | `v3\@claude-flow\cli\src\mcp-tools\progress-tools.ts` |
| `progress_watch` | Get current watch status for progress monitoring | `v3\@claude-flow\cli\src\mcp-tools\progress-tools.ts` |
| `route` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `ruvllm_chat_format` | Format chat messages using a template (llama3, mistral, chatml, phi, gemma, or auto-detect). | `v3\@claude-flow\cli\src\mcp-tools\ruvllm-tools.ts` |
| `ruvllm_generate_config` | Create a generation config (maxTokens, temperature, topP, etc.) as JSON. | `v3\@claude-flow\cli\src\mcp-tools\ruvllm-tools.ts` |
| `ruvllm_hnsw_add` | Add a pattern to an HNSW router. Embedding must match router dimensions. | `v3\@claude-flow\cli\src\mcp-tools\ruvllm-tools.ts` |
| `ruvllm_hnsw_create` | Create a WASM HNSW router for semantic pattern routing. Max ~11 patterns (v2.0.1 limit). | `v3\@claude-flow\cli\src\mcp-tools\ruvllm-tools.ts` |
| `ruvllm_hnsw_route` | Route a query embedding to nearest patterns in HNSW index. | `v3\@claude-flow\cli\src\mcp-tools\ruvllm-tools.ts` |
| `ruvllm_microlora_adapt` | Adapt MicroLoRA weights with quality feedback. | `v3\@claude-flow\cli\src\mcp-tools\ruvllm-tools.ts` |
| `ruvllm_microlora_create` | Create a MicroLoRA adapter (ultra-lightweight LoRA, ranks 1-4). | `v3\@claude-flow\cli\src\mcp-tools\ruvllm-tools.ts` |
| `ruvllm_sona_adapt` | Run SONA instant adaptation with a quality signal. | `v3\@claude-flow\cli\src\mcp-tools\ruvllm-tools.ts` |
| `ruvllm_sona_create` | Create a SONA instant adaptation loop (<1ms adaptation cycles). | `v3\@claude-flow\cli\src\mcp-tools\ruvllm-tools.ts` |
| `ruvllm_status` | Get ruvllm-wasm availability and initialization status. | `v3\@claude-flow\cli\src\mcp-tools\ruvllm-tools.ts` |
| `session_delete` | Delete a saved session | `v3\@claude-flow\cli\src\mcp-tools\session-tools.ts` |
| `session_info` | Get detailed session information | `v3\@claude-flow\cli\src\mcp-tools\session-tools.ts` |
| `session_list` | List saved sessions | `v3\@claude-flow\cli\src\mcp-tools\session-tools.ts` |
| `session_restore` | Restore a saved session | `v3\@claude-flow\cli\src\mcp-tools\session-tools.ts` |
| `session_save` | Save current session state | `v3\@claude-flow\cli\src\mcp-tools\session-tools.ts` |
| `session-end` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `session-restore` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `session-start` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `swarm` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\system-tools.ts` |
| `swarm_exists` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\swarm-tools.ts` |
| `swarm_health` | Check swarm health status with real state inspection | `v3\@claude-flow\cli\src\mcp-tools\swarm-tools.ts` |
| `swarm_init` | Initialize a swarm with persistent state tracking | `v3\@claude-flow\cli\src\mcp-tools\swarm-tools.ts` |
| `swarm_shutdown` | Shutdown a swarm and update persistent state | `v3\@claude-flow\cli\src\mcp-tools\swarm-tools.ts` |
| `swarm_status` | Get swarm status from persistent state | `v3\@claude-flow\cli\src\mcp-tools\swarm-tools.ts` |
| `system_health` | Perform system health check | `v3\@claude-flow\cli\src\mcp-tools\system-tools.ts` |
| `system_info` | Get system information | `v3\@claude-flow\cli\src\mcp-tools\system-tools.ts` |
| `system_metrics` | Get system metrics and performance data | `v3\@claude-flow\cli\src\mcp-tools\system-tools.ts` |
| `system_reset` | Reset system state | `v3\@claude-flow\cli\src\mcp-tools\system-tools.ts` |
| `system_status` | Get overall system status | `v3\@claude-flow\cli\src\mcp-tools\system-tools.ts` |
| `task_assign` | Assign a task to one or more agents | `v3\@claude-flow\cli\src\mcp-tools\task-tools.ts` |
| `task_cancel` | Cancel a task | `v3\@claude-flow\cli\src\mcp-tools\task-tools.ts` |
| `task_complete` | Mark task as complete | `v3\@claude-flow\cli\src\mcp-tools\task-tools.ts` |
| `task_create` | Create a new task | `v3\@claude-flow\cli\src\mcp-tools\task-tools.ts` |
| `task_list` | List all tasks | `v3\@claude-flow\cli\src\mcp-tools\task-tools.ts` |
| `task_status` | Get task status | `v3\@claude-flow\cli\src\mcp-tools\task-tools.ts` |
| `task_summary` | Get a summary of all tasks by status | `v3\@claude-flow\cli\src\mcp-tools\system-tools.ts` |
| `task_update` | Update task status or progress | `v3\@claude-flow\cli\src\mcp-tools\task-tools.ts` |
| `terminal_close` | Close a terminal session | `v3\@claude-flow\cli\src\mcp-tools\terminal-tools.ts` |
| `terminal_create` | Create a new terminal session | `v3\@claude-flow\cli\src\mcp-tools\terminal-tools.ts` |
| `terminal_execute` | Execute a command in a terminal session | `v3\@claude-flow\cli\src\mcp-tools\terminal-tools.ts` |
| `terminal_history` | Get command history for a terminal session | `v3\@claude-flow\cli\src\mcp-tools\terminal-tools.ts` |
| `terminal_list` | List all terminal sessions | `v3\@claude-flow\cli\src\mcp-tools\terminal-tools.ts` |
| `topology` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\swarm-tools.ts` |
| `transfer` | *(no description)* | `v3\@claude-flow\cli\src\mcp-tools\hooks-tools.ts` |
| `transfer_detect-pii` | Detect PII in content without redacting | `v3\@claude-flow\cli\src\mcp-tools\transfer-tools.ts` |
| `transfer_ipfs-resolve` | Resolve IPNS name to CID | `v3\@claude-flow\cli\src\mcp-tools\transfer-tools.ts` |
| `transfer_plugin-featured` | Get featured plugins from the store | `v3\@claude-flow\cli\src\mcp-tools\transfer-tools.ts` |
| `transfer_plugin-info` | Get detailed info about a plugin | `v3\@claude-flow\cli\src\mcp-tools\transfer-tools.ts` |
| `transfer_plugin-official` | Get official plugins from the store | `v3\@claude-flow\cli\src\mcp-tools\transfer-tools.ts` |
| `transfer_plugin-search` | Search the plugin store | `v3\@claude-flow\cli\src\mcp-tools\transfer-tools.ts` |
| `transfer_store-download` | Download a pattern from the store | `v3\@claude-flow\cli\src\mcp-tools\transfer-tools.ts` |
| `transfer_store-featured` | Get featured patterns from the store | `v3\@claude-flow\cli\src\mcp-tools\transfer-tools.ts` |
| `transfer_store-info` | Get detailed info about a pattern | `v3\@claude-flow\cli\src\mcp-tools\transfer-tools.ts` |
| `transfer_store-search` | Search the pattern store | `v3\@claude-flow\cli\src\mcp-tools\transfer-tools.ts` |
| `transfer_store-trending` | Get trending patterns from the store | `v3\@claude-flow\cli\src\mcp-tools\transfer-tools.ts` |
| `wasm_agent_create` | Create a sandboxed WASM agent with virtual filesystem (no OS access). Optionally use a gallery template. | `v3\@claude-flow\cli\src\mcp-tools\wasm-agent-tools.ts` |
| `wasm_agent_export` | Export a WASM agent\ | `v3\@claude-flow\cli\src\mcp-tools\wasm-agent-tools.ts` |
| `wasm_agent_files` | Get a WASM agent\ | `v3\@claude-flow\cli\src\mcp-tools\wasm-agent-tools.ts` |
| `wasm_agent_list` | List all active WASM agents. | `v3\@claude-flow\cli\src\mcp-tools\wasm-agent-tools.ts` |
| `wasm_agent_prompt` | Send a prompt to a WASM agent and get a response. | `v3\@claude-flow\cli\src\mcp-tools\wasm-agent-tools.ts` |
| `wasm_agent_terminate` | Terminate a WASM agent and free resources. | `v3\@claude-flow\cli\src\mcp-tools\wasm-agent-tools.ts` |
| `wasm_agent_tool` | Execute a tool on a WASM agent sandbox. Tools: read_file, write_file, edit_file, write_todos, list_files. Use flat format: {tool, path, content, ...}. | `v3\@claude-flow\cli\src\mcp-tools\wasm-agent-tools.ts` |
| `wasm_gallery_create` | Create a WASM agent from a gallery template. | `v3\@claude-flow\cli\src\mcp-tools\wasm-agent-tools.ts` |
| `wasm_gallery_list` | List all available WASM agent gallery templates (Coder, Researcher, Tester, Reviewer, Security, Swarm). | `v3\@claude-flow\cli\src\mcp-tools\wasm-agent-tools.ts` |
| `wasm_gallery_search` | Search WASM agent gallery templates by query. | `v3\@claude-flow\cli\src\mcp-tools\wasm-agent-tools.ts` |
| `workflow_cancel` | Cancel a workflow | `v3\@claude-flow\cli\src\mcp-tools\workflow-tools.ts` |
| `workflow_create` | Create a new workflow | `v3\@claude-flow\cli\src\mcp-tools\workflow-tools.ts` |
| `workflow_delete` | Delete a workflow | `v3\@claude-flow\cli\src\mcp-tools\workflow-tools.ts` |
| `workflow_execute` | Execute a workflow | `v3\@claude-flow\cli\src\mcp-tools\workflow-tools.ts` |
| `workflow_list` | List all workflows | `v3\@claude-flow\cli\src\mcp-tools\workflow-tools.ts` |
| `workflow_pause` | Pause a running workflow | `v3\@claude-flow\cli\src\mcp-tools\workflow-tools.ts` |
| `workflow_resume` | Resume a paused workflow | `v3\@claude-flow\cli\src\mcp-tools\workflow-tools.ts` |
| `workflow_run` | Run a workflow from a template or file | `v3\@claude-flow\cli\src\mcp-tools\workflow-tools.ts` |
| `workflow_status` | Get workflow status | `v3\@claude-flow\cli\src\mcp-tools\workflow-tools.ts` |
| `workflow_template` | Save workflow as template or create from template | `v3\@claude-flow\cli\src\mcp-tools\workflow-tools.ts` |
### CLI commands (49)
@@ -726,103 +731,103 @@ Top-level command surface. Subcommands are documented per-command in the source
| Command | Description | Source |
|---|---|---|
| `ruflo agent` | Agent management commands | `v3/@claude-flow/cli/src/commands/agent.ts` |
| `ruflo analyze` | Code analysis, diff classification, graph boundaries, and change risk assessment | `v3/@claude-flow/cli/src/commands/analyze.ts` |
| `ruflo appliance` | Self-contained RVFA appliance management (build, inspect, verify, extract, run) | `v3/@claude-flow/cli/src/commands/appliance.ts` |
| `ruflo autopilot` | Persistent swarm completion — keeps agents working until ALL tasks are done | `v3/@claude-flow/cli/src/commands/autopilot.ts` |
| `ruflo benchmark` | Performance benchmarking for self-learning and neural systems | `v3/@claude-flow/cli/src/commands/benchmark.ts` |
| `ruflo claims` | Claims-based authorization, permissions, and access control | `v3/@claude-flow/cli/src/commands/claims.ts` |
| `ruflo cleanup` | Remove project artifacts created by claude-flow/ruflo | `v3/@claude-flow/cli/src/commands/cleanup.ts` |
| `ruflo completions` | Generate shell completion scripts | `v3/@claude-flow/cli/src/commands/completions.ts` |
| `ruflo config` | Configuration management | `v3/@claude-flow/cli/src/commands/config.ts` |
| `ruflo daemon` | Manage background worker daemon (Node.js-based, auto-runs like shell helpers) | `v3/@claude-flow/cli/src/commands/daemon.ts` |
| `ruflo deployment` | Deployment management, environments, rollbacks | `v3/@claude-flow/cli/src/commands/deployment.ts` |
| `ruflo doctor` | System diagnostics and health checks | `v3/@claude-flow/cli/src/commands/doctor.ts` |
| `ruflo download` | Download a pattern from the registry | `v3/@claude-flow/cli/src/commands/transfer-store.ts` |
| `ruflo embeddings` | Vector embeddings, semantic search, similarity operations | `v3/@claude-flow/cli/src/commands/embeddings.ts` |
| `ruflo guidance` | Guidance Control Plane - compile, retrieve, enforce, and optimize guidance rules | `v3/@claude-flow/cli/src/commands/guidance.ts` |
| `ruflo hive-mind` | Queen-led consensus-based multi-agent coordination | `v3/@claude-flow/cli/src/commands/hive-mind.ts` |
| `ruflo hooks` | Self-learning hooks system for intelligent workflow automation | `v3/@claude-flow/cli/src/commands/hooks.ts` |
| `ruflo info` | Show detailed information about a pattern | `v3/@claude-flow/cli/src/commands/transfer-store.ts` |
| `ruflo init` | Initialize RuFlo in the current directory | `v3/@claude-flow/cli/src/commands/init.ts` |
| `ruflo issues` | Collaborative issue claims for human-agent workflows (ADR-016) | `v3/@claude-flow/cli/src/commands/issues.ts` |
| `ruflo list` | List patterns from decentralized registry | `v3/@claude-flow/cli/src/commands/transfer-store.ts` |
| `ruflo mcp` | MCP server management | `v3/@claude-flow/cli/src/commands/mcp.ts` |
| `ruflo memory` | Memory management commands | `v3/@claude-flow/cli/src/commands/memory.ts` |
| `ruflo migrate` | V2 to V3 migration tools | `v3/@claude-flow/cli/src/commands/migrate.ts` |
| `ruflo neural` | Neural pattern training, MoE, Flash Attention, pattern learning | `v3/@claude-flow/cli/src/commands/neural.ts` |
| `ruflo performance` | Performance profiling, benchmarking, optimization, metrics | `v3/@claude-flow/cli/src/commands/performance.ts` |
| `ruflo plugins` | Plugin management with IPFS-based decentralized registry | `v3/@claude-flow/cli/src/commands/plugins.ts` |
| `ruflo process` | Background process management, daemon, and monitoring | `v3/@claude-flow/cli/src/commands/process.ts` |
| `ruflo progress` | Check V3 implementation progress | `v3/@claude-flow/cli/src/commands/progress.ts` |
| `ruflo providers` | Manage AI providers, models, and configurations | `v3/@claude-flow/cli/src/commands/providers.ts` |
| `ruflo publish` | Publish an RVFA appliance to IPFS via Pinata | `v3/@claude-flow/cli/src/commands/appliance-advanced.ts` |
| `ruflo publish` | Publish a pattern to the decentralized registry | `v3/@claude-flow/cli/src/commands/transfer-store.ts` |
| `ruflo route` | Intelligent task-to-agent routing using Q-Learning | `v3/@claude-flow/cli/src/commands/route.ts` |
| `ruflo search` | Search patterns in the decentralized registry | `v3/@claude-flow/cli/src/commands/transfer-store.ts` |
| `ruflo security` | Security scanning, CVE detection, threat modeling, AI defense | `v3/@claude-flow/cli/src/commands/security.ts` |
| `ruflo session` | Session management commands | `v3/@claude-flow/cli/src/commands/session.ts` |
| `ruflo sign` | Sign an RVFA appliance with Ed25519 for tamper detection | `v3/@claude-flow/cli/src/commands/appliance-advanced.ts` |
| `ruflo start` | Start the RuFlo orchestration system | `v3/@claude-flow/cli/src/commands/start.ts` |
| `ruflo status` | Show system status | `v3/@claude-flow/cli/src/commands/status.ts` |
| `ruflo store` | Pattern marketplace - list, search, download, publish | `v3/@claude-flow/cli/src/commands/transfer-store.ts` |
| `ruflo swarm` | Swarm coordination commands | `v3/@claude-flow/cli/src/commands/swarm.ts` |
| `ruflo task` | Task management commands | `v3/@claude-flow/cli/src/commands/task.ts` |
| `ruflo update` | Hot-patch a section in an RVFA appliance | `v3/@claude-flow/cli/src/commands/appliance-advanced.ts` |
| `ruflo verify` | Verify installed artifact against the signed witness manifest | `v3/@claude-flow/cli/src/commands/verify.ts` |
| `ruflo wasm-create` | Create a WASM-sandboxed agent | `v3/@claude-flow/cli/src/commands/agent-wasm.ts` |
| `ruflo wasm-gallery` | List available WASM agent gallery templates | `v3/@claude-flow/cli/src/commands/agent-wasm.ts` |
| `ruflo wasm-prompt` | Send a prompt to a WASM agent | `v3/@claude-flow/cli/src/commands/agent-wasm.ts` |
| `ruflo wasm-status` | Check rvagent-wasm availability, version, and capabilities | `v3/@claude-flow/cli/src/commands/agent-wasm.ts` |
| `ruflo workflow` | Workflow execution and management | `v3/@claude-flow/cli/src/commands/workflow.ts` |
| `ruflo agent` | Agent management commands | `v3\@claude-flow\cli\src\commands\agent.ts` |
| `ruflo analyze` | Code analysis, diff classification, graph boundaries, and change risk assessment | `v3\@claude-flow\cli\src\commands\analyze.ts` |
| `ruflo appliance` | Self-contained RVFA appliance management (build, inspect, verify, extract, run) | `v3\@claude-flow\cli\src\commands\appliance.ts` |
| `ruflo autopilot` | Persistent swarm completion — keeps agents working until ALL tasks are done | `v3\@claude-flow\cli\src\commands\autopilot.ts` |
| `ruflo benchmark` | Performance benchmarking for self-learning and neural systems | `v3\@claude-flow\cli\src\commands\benchmark.ts` |
| `ruflo claims` | Claims-based authorization, permissions, and access control | `v3\@claude-flow\cli\src\commands\claims.ts` |
| `ruflo cleanup` | Remove project artifacts created by claude-flow/ruflo | `v3\@claude-flow\cli\src\commands\cleanup.ts` |
| `ruflo completions` | Generate shell completion scripts | `v3\@claude-flow\cli\src\commands\completions.ts` |
| `ruflo config` | Configuration management | `v3\@claude-flow\cli\src\commands\config.ts` |
| `ruflo daemon` | Manage background worker daemon (Node.js-based, auto-runs like shell helpers) | `v3\@claude-flow\cli\src\commands\daemon.ts` |
| `ruflo deployment` | Deployment management, environments, rollbacks | `v3\@claude-flow\cli\src\commands\deployment.ts` |
| `ruflo doctor` | System diagnostics and health checks | `v3\@claude-flow\cli\src\commands\doctor.ts` |
| `ruflo download` | Download a pattern from the registry | `v3\@claude-flow\cli\src\commands\transfer-store.ts` |
| `ruflo embeddings` | Vector embeddings, semantic search, similarity operations | `v3\@claude-flow\cli\src\commands\embeddings.ts` |
| `ruflo guidance` | Guidance Control Plane - compile, retrieve, enforce, and optimize guidance rules | `v3\@claude-flow\cli\src\commands\guidance.ts` |
| `ruflo hive-mind` | Queen-led consensus-based multi-agent coordination | `v3\@claude-flow\cli\src\commands\hive-mind.ts` |
| `ruflo hooks` | Self-learning hooks system for intelligent workflow automation | `v3\@claude-flow\cli\src\commands\hooks.ts` |
| `ruflo info` | Show detailed information about a pattern | `v3\@claude-flow\cli\src\commands\transfer-store.ts` |
| `ruflo init` | Initialize RuFlo in the current directory | `v3\@claude-flow\cli\src\commands\init.ts` |
| `ruflo issues` | Collaborative issue claims for human-agent workflows (ADR-016) | `v3\@claude-flow\cli\src\commands\issues.ts` |
| `ruflo list` | List patterns from decentralized registry | `v3\@claude-flow\cli\src\commands\transfer-store.ts` |
| `ruflo mcp` | MCP server management | `v3\@claude-flow\cli\src\commands\mcp.ts` |
| `ruflo memory` | Memory management commands | `v3\@claude-flow\cli\src\commands\memory.ts` |
| `ruflo migrate` | V2 to V3 migration tools | `v3\@claude-flow\cli\src\commands\migrate.ts` |
| `ruflo neural` | Neural pattern training, MoE, Flash Attention, pattern learning | `v3\@claude-flow\cli\src\commands\neural.ts` |
| `ruflo performance` | Performance profiling, benchmarking, optimization, metrics | `v3\@claude-flow\cli\src\commands\performance.ts` |
| `ruflo plugins` | Plugin management with IPFS-based decentralized registry | `v3\@claude-flow\cli\src\commands\plugins.ts` |
| `ruflo process` | Background process management, daemon, and monitoring | `v3\@claude-flow\cli\src\commands\process.ts` |
| `ruflo progress` | Check V3 implementation progress | `v3\@claude-flow\cli\src\commands\progress.ts` |
| `ruflo providers` | Manage AI providers, models, and configurations | `v3\@claude-flow\cli\src\commands\providers.ts` |
| `ruflo publish` | Publish an RVFA appliance to IPFS via Pinata | `v3\@claude-flow\cli\src\commands\appliance-advanced.ts` |
| `ruflo publish` | Publish a pattern to the decentralized registry | `v3\@claude-flow\cli\src\commands\transfer-store.ts` |
| `ruflo route` | Intelligent task-to-agent routing using Q-Learning | `v3\@claude-flow\cli\src\commands\route.ts` |
| `ruflo search` | Search patterns in the decentralized registry | `v3\@claude-flow\cli\src\commands\transfer-store.ts` |
| `ruflo security` | Security scanning, CVE detection, threat modeling, AI defense | `v3\@claude-flow\cli\src\commands\security.ts` |
| `ruflo session` | Session management commands | `v3\@claude-flow\cli\src\commands\session.ts` |
| `ruflo sign` | Sign an RVFA appliance with Ed25519 for tamper detection | `v3\@claude-flow\cli\src\commands\appliance-advanced.ts` |
| `ruflo start` | Start the RuFlo orchestration system | `v3\@claude-flow\cli\src\commands\start.ts` |
| `ruflo status` | Show system status | `v3\@claude-flow\cli\src\commands\status.ts` |
| `ruflo store` | Pattern marketplace - list, search, download, publish | `v3\@claude-flow\cli\src\commands\transfer-store.ts` |
| `ruflo swarm` | Swarm coordination commands | `v3\@claude-flow\cli\src\commands\swarm.ts` |
| `ruflo task` | Task management commands | `v3\@claude-flow\cli\src\commands\task.ts` |
| `ruflo update` | Hot-patch a section in an RVFA appliance | `v3\@claude-flow\cli\src\commands\appliance-advanced.ts` |
| `ruflo verify` | Verify installed artifact against the signed witness manifest | `v3\@claude-flow\cli\src\commands\verify.ts` |
| `ruflo wasm-create` | Create a WASM-sandboxed agent | `v3\@claude-flow\cli\src\commands\agent-wasm.ts` |
| `ruflo wasm-gallery` | List available WASM agent gallery templates | `v3\@claude-flow\cli\src\commands\agent-wasm.ts` |
| `ruflo wasm-prompt` | Send a prompt to a WASM agent | `v3\@claude-flow\cli\src\commands\agent-wasm.ts` |
| `ruflo wasm-status` | Check rvagent-wasm availability, version, and capabilities | `v3\@claude-flow\cli\src\commands\agent-wasm.ts` |
| `ruflo workflow` | Workflow execution and management | `v3\@claude-flow\cli\src\commands\workflow.ts` |
### Plugins (32)
| Plugin | Version | Description |
|---|---|---|
| `ruflo-adr` | 0.1.0 | ADR lifecycle management — create, index, supersede, and link Architecture Decision Records to code |
| `ruflo-agentdb` | 0.1.0 | AgentDB memory controllers with HNSW vector search, RuVector embeddings, and causal knowledge graphs |
| `ruflo-aidefence` | 0.1.0 | AI safety scanning, PII detection, prompt injection defense, and adaptive threat learning |
| `ruflo-autopilot` | 0.1.0 | Autonomous /loop-driven task completion with learning, prediction, and progress tracking |
| `ruflo-browser` | 0.1.0 | Agentic browser automation with Playwright for testing, scraping, and UI interaction |
| `ruflo-core` | 0.1.0 | Core Ruflo MCP tools, commands, and Claude Code orchestration patterns |
| `ruflo-cost-tracker` | 0.1.0 | Token usage tracking, model cost attribution per agent, budget alerts, and optimization recommendations |
| `ruflo-daa` | 0.1.0 | Dynamic Agentic Architecture with cognitive patterns, knowledge sharing, and adaptive agents |
| `ruflo-ddd` | 0.1.0 | Domain-Driven Design scaffolding — bounded contexts, aggregate roots, domain events, and anti-corruption layers |
| `ruflo-docs` | 0.1.0 | Documentation generation, API docs, and drift detection |
| `ruflo-adr` | 0.3.0 | ADR lifecycle management — create, index, supersede, check compliance, and link Architecture Decision Records to code via AgentDB hierarchical store + causal edges (supersedes/amends/depends-on/related) |
| `ruflo-agentdb` | 0.3.0 | Substrate plugin for Ruflo memory: AgentDB controller bridge (15 agentdb_* MCP tools), RuVector ONNX embeddings (10 embeddings_* tools incl. RaBitQ 32x quantization), and WASM HNSW pattern router (3 ruvllm_hnsw_* tools) |
| `ruflo-aidefence` | 0.2.0 | AI safety scanning, PII detection, prompt injection defense, and adaptive threat learning |
| `ruflo-autopilot` | 0.2.0 | Autonomous /loop-driven task completion with learning, prediction, and progress tracking — wraps 10 autopilot_* MCP tools (status/enable/disable/config/reset/log/progress/learn/history/predict) |
| `ruflo-browser` | 0.2.0 | Session-as-skill browser automation: Playwright + RVF cognitive containers + ruvector trajectories + AgentDB selector memory + AIDefence PII/injection gates |
| `ruflo-core` | 0.2.0 | Foundation plugin — registers the ruflo MCP server (300+ tools across memory/agentdb/embeddings/hooks/aidefence/neural/autopilot/browser/agent/swarm), provides 3 generalist agents (coder/researcher/reviewer), 3 first-run skills, and a curated plugin-discovery catalog |
| `ruflo-cost-tracker` | 0.16.1 | Token usage tracking, model cost attribution per agent, budget alerts, and optimization recommendations — uses memory_* (namespace-routed) for cost-tracking and cost-patterns; pairs with federation budget circuit breaker (ADR-097) |
| `ruflo-daa` | 0.2.0 | Dynamic Agentic Architecture — 8 daa_* MCP tools for adaptive agents (create/adapt), cognitive patterns, workflows (create/execute), knowledge sharing, and learning/performance metrics. Feeds the JUDGE phase of the 4-step intelligence pipeline. |
| `ruflo-ddd` | 0.2.0 | Domain-Driven Design scaffolding — bounded contexts, aggregate roots, domain events, value objects, repositories, and anti-corruption layers; navigable domain graph stored in AgentDB |
| `ruflo-docs` | 0.2.0 | Documentation generation, API docs (JSDoc/TSDoc/OpenAPI), and drift detection — drives the `document` background worker via hooks_worker-dispatch; uses Haiku model for cost-efficient docs work |
| `ruflo-federation` | 0.2.0 | Cross-installation agent federation with zero-trust security, peer discovery, consensus-based task routing, and per-call budget circuit breaker (ADR-097) |
| `ruflo-goals` | 0.1.0 | Long-horizon goal planning, deep research orchestration, and adaptive replanning using GOAP algorithms |
| `ruflo-intelligence` | 0.1.0 | Self-learning neural intelligence with SONA patterns, trajectory learning, and intelligent model routing |
| `ruflo-iot-cognitum` | 0.1.0 | IoT device lifecycle, telemetry anomaly detection, fleet management, and witness chain verification for Cognitum Seed hardware |
| `ruflo-jujutsu` | 0.1.0 | Advanced git workflows with diff analysis, risk scoring, and reviewer recommendations |
| `ruflo-knowledge-graph` | 0.1.0 | Knowledge graph construction — entity extraction, relation mapping, and pathfinder graph traversal |
| `ruflo-loop-workers` | 0.1.0 | Cache-aware /loop workers and CronCreate background automation |
| `ruflo-market-data` | 0.1.0 | Market data ingestion — feed normalization, OHLCV vectorization, and HNSW-indexed pattern matching |
| `ruflo-migrations` | 0.1.0 | Schema migration management — generate, validate, dry-run, and rollback database migrations |
| `ruflo-goals` | 0.2.0 | Long-horizon goal planning, deep research orchestration, and adaptive replanning using GOAP algorithms |
| `ruflo-intelligence` | 0.3.0 | User-facing surface for Ruflo's self-learning system: 6 neural_* + 10 hooks_intelligence_* + 9 routing/meta hooks + 4 SONA/MicroLoRA tools (29 total). Implements the 4-step pipeline (RETRIEVE → JUDGE → DISTILL → CONSOLIDATE) and IPFS-based cross-project pattern transfer. |
| `ruflo-iot-cognitum` | 0.2.0 | IoT device lifecycle, telemetry anomaly detection, fleet management, and witness chain verification for Cognitum Seed hardware |
| `ruflo-jujutsu` | 0.2.0 | Advanced git workflows with diff analysis, risk scoring, change classification (feature/bugfix/refactor/...), and reviewer recommendations — wraps 6 analyze_* MCP tools (diff, diff-risk, diff-classify, diff-reviewers, file-risk, diff-stats) |
| `ruflo-knowledge-graph` | 0.2.0 | Knowledge graph construction — entity extraction, relation mapping, and pathfinder graph traversal |
| `ruflo-loop-workers` | 0.2.0 | Cache-aware /loop workers and CronCreate background automation — wraps 5 hooks_worker-* MCP tools (list/dispatch/status/detect/cancel) and exposes 12 background worker triggers (ultralearn, optimize, consolidate, predict, audit, map, preload, deepdive, document, refactor, benchmark, testgaps) |
| `ruflo-market-data` | 0.2.0 | Market data ingestion — feed normalization, OHLCV vectorization, and HNSW-indexed pattern matching |
| `ruflo-migrations` | 0.2.0 | Schema migration management — generate, validate, dry-run, and rollback database migrations |
| `ruflo-neural-trader` | 0.2.0 | Neural trading via npx neural-trader — self-learning strategies, Rust/NAPI backtesting, 112+ MCP tools, swarm coordination, and portfolio optimization |
| `ruflo-observability` | 0.1.0 | Structured logging, distributed tracing, and metrics — correlate agent swarm activity with application telemetry |
| `ruflo-plugin-creator` | 0.1.0 | Scaffold, validate, and publish new Claude Code plugins with proper structure and MCP tool wiring |
| `ruflo-rag-memory` | 0.1.0 | RuVector memory with HNSW search, AgentDB, and semantic retrieval |
| `ruflo-ruvector` | 0.2.0 | Self-learning vector database via npx ruvector — HNSW, FlashAttention-3, Graph RAG, hybrid search, DiskANN, 103 MCP tools, Brain AGI |
| `ruflo-ruvllm` | 0.1.0 | RuVLLM local inference with chat formatting, model configuration, and MicroLoRA fine-tuning |
| `ruflo-rvf` | 0.1.0 | RVF format for portable agent memory, session persistence, and cross-platform transfer |
| `ruflo-security-audit` | 0.1.0 | Security review, dependency scanning, policy gates, and CVE monitoring |
| `ruflo-sparc` | 0.1.0 | SPARC methodology — Specification, Pseudocode, Architecture, Refinement, Completion phases with gate checks |
| `ruflo-swarm` | 0.1.0 | Agent teams, swarm coordination, Monitor streams, and worktree isolation |
| `ruflo-testgen` | 0.1.0 | Test gap detection, coverage analysis, and automated test generation |
| `ruflo-wasm` | 0.1.0 | Sandboxed WASM agent creation, execution, and gallery sharing |
| `ruflo-workflows` | 0.1.0 | Visual workflow automation with templates, orchestration, and lifecycle management |
| `ruflo-observability` | 0.2.0 | Structured logging, distributed tracing, and metrics — correlate agent swarm activity with application telemetry |
| `ruflo-plugin-creator` | 0.2.0 | Scaffold, validate, and publish new Claude Code plugins with the canonical plugin contract — ADR + smoke + Compatibility + namespace coordination + MCP-tool drift warnings |
| `ruflo-rag-memory` | 0.2.0 | RuVector memory with HNSW search, AgentDB, and semantic retrieval |
| `ruflo-ruvector` | 0.2.1 | Self-learning vector database via npx ruvector@0.2.25 — HNSW, adaptive LoRA embeddings, code-graph clustering, hooks routing, brain/SONA, 103 MCP tools |
| `ruflo-ruvllm` | 0.2.0 | RuVLLM local inference with chat formatting (Claude/GPT/Gemini/Ollama/Cohere), model configuration, MicroLoRA fine-tuning, and SONA real-time adaptation |
| `ruflo-rvf` | 0.2.0 | RVF format for portable agent memory, session persistence, and cross-platform transfer |
| `ruflo-security-audit` | 0.2.0 | Security review, dependency scanning, policy gates, and CVE monitoring |
| `ruflo-sparc` | 0.2.0 | SPARC methodology — Specification, Pseudocode, Architecture, Refinement, Completion phases with gate checks |
| `ruflo-swarm` | 0.2.0 | Agent teams, swarm coordination, Monitor streams, and worktree isolation — wraps 4 swarm_* + 8 agent_* MCP tools (12 total) plus 6 topologies (hierarchical / mesh / hierarchical-mesh / ring / star / adaptive) |
| `ruflo-testgen` | 0.2.0 | Test gap detection, coverage analysis, and automated test generation — drives the testgaps background worker via hooks_worker-dispatch; SPARC Refinement-phase canonical owner |
| `ruflo-wasm` | 0.2.0 | Sandboxed WASM agent creation, execution, and gallery sharing — wraps 10 wasm_* MCP tools (agent_create/prompt/tool/list/terminate/files/export + gallery_list/search/create); built on @ruvector/rvagent-wasm + @ruvector/ruvllm-wasm per ADR-070 (Implemented) |
| `ruflo-workflows` | 0.2.0 | Workflow automation with templates, orchestration, and lifecycle management — wraps 10 workflow_* MCP tools (create/run/execute/status/list/pause/resume/cancel/delete/template) with full state-machine lifecycle (created → running ↔ paused → completed/cancelled) |
### Agents (43)
### Agents (44)
| Agent | Plugin | Description |
|---|---|---|
| `adr-architect` | ruflo-adr | ADR lifecycle manager -- create, index, supersede, and link Architecture Decision Records to code |
| `agentdb-specialist` | ruflo-agentdb | AgentDB and RuVector specialist for memory operations, HNSW indexing, and semantic search |
| `agentdb-specialist` | ruflo-agentdb | AgentDB and RuVector specialist for memory operations, HNSW indexing, RaBitQ quantization, and semantic search across the controller bridge |
| `architect` | ruflo-swarm | System architect for designing implementation approaches, API contracts, and module boundaries |
| `autopilot-coordinator` | ruflo-autopilot | Autonomous task completion coordinator using /loop and autopilot MCP tools |
| `backtest-engineer` | ruflo-neural-trader | Backtesting specialist using npx neural-trader Rust/NAPI engine — walk-forward validation, Monte Carlo simulation, parameter optimization |
| `browser-agent` | ruflo-browser | Browser automation agent for UI testing, web scraping, and interactive page validation |
| `browser-agent` | ruflo-browser | Browser automation agent — drives Playwright via 23 MCP tools, captures every session as an RVF container with a ruvector trajectory, and gates content through AIDefence |
| `coder` | ruflo-core | Implementation specialist for writing clean, efficient code following project patterns |
| `coordinator` | ruflo-swarm | Swarm coordinator that manages agent lifecycle, task assignment, and anti-drift enforcement |
| `cost-analyst` | ruflo-cost-tracker | Tracks token usage per agent and model, computes cost attribution in USD, monitors budgets, and recommends optimizations |
@@ -832,13 +837,14 @@ Top-level command surface. Subcommands are documented per-command in the source
| `device-coordinator` | ruflo-iot-cognitum | Manages Cognitum Seed device fleet as Ruflo agent swarm members with 5-tier trust scoring |
| `docs-writer` | ruflo-docs | Documentation specialist -- generates and maintains project documentation |
| `domain-modeler` | ruflo-ddd | Domain-Driven Design specialist -- maps domains to bounded contexts, designs aggregate roots, defines domain events, and generates anti-corruption layers |
| `dossier-investigator` | ruflo-goals | Recursive parallel multi-source investigator that fans out across web, memory, knowledge-graph, codebase, and ADR index to build a graph-structured dossier on a seed entity, with budget caps, de-duplication, and provenance per claim |
| `federation-coordinator` | ruflo-federation | Orchestrates cross-installation agent federation with zero-trust security |
| `fleet-manager` | ruflo-iot-cognitum | Manages device fleets, firmware rollouts, and fleet-wide policies |
| `git-specialist` | ruflo-jujutsu | Git workflow specialist for diff analysis, risk assessment, and PR management |
| `goal-planner` | ruflo-goals | GOAP specialist that creates optimal action plans using A* search through state spaces, with adaptive replanning, trajectory learning, and multi-mode execution |
| `graph-navigator` | ruflo-knowledge-graph | Extracts entities and relations from code and docs, builds knowledge graphs, and traverses them with pathfinder scoring |
| `horizon-tracker` | ruflo-goals | Long-horizon objective tracker that persists progress across sessions with milestone checkpoints, drift detection, and adaptive timeline management |
| `intelligence-specialist` | ruflo-intelligence | Self-learning intelligence specialist focused on neural training, pattern discovery, and routing optimization |
| `intelligence-specialist` | ruflo-intelligence | Self-learning intelligence specialist — drives the 4-step pipeline (RETRIEVE → JUDGE → DISTILL → CONSOLIDATE) across 29 MCP tools, coordinates with ruflo-agentdb namespaces, and ships patterns cross-project via IPFS |
| `llm-specialist` | ruflo-ruvllm | RuVLLM specialist for local inference configuration, MicroLoRA fine-tuning, and multi-provider routing |
| `loop-worker-coordinator` | ruflo-loop-workers | Coordinates background worker scheduling, health monitoring, and dispatch across loop and cron execution modes |
| `market-analyst` | ruflo-neural-trader | Market regime detection and technical analysis using npx neural-trader — RSI, MACD, Bollinger Bands, volume profile, regime classification |
@@ -856,7 +862,7 @@ Top-level command surface. Subcommands are documented per-command in the source
| `telemetry-analyzer` | ruflo-iot-cognitum | Analyzes Cognitum Seed device telemetry for anomalies using Z-score detection |
| `tester` | ruflo-testgen | Specialized testing agent -- writes comprehensive tests using TDD London School |
| `trading-strategist` | ruflo-neural-trader | Designs and optimizes neural trading strategies using npx neural-trader — LSTM/Transformer models, Rust/NAPI backtesting, Z-score anomaly detection |
| `vector-engineer` | ruflo-ruvector | Vector operations specialist using npx ruvector — HNSW indexing, FlashAttention-3, Graph RAG, hybrid search, DiskANN, Brain AGI, 103 MCP tools |
| `vector-engineer` | ruflo-ruvector | Vector operations specialist using npx ruvector@0.2.25 — HNSW indexing, adaptive LoRA embeddings, code-graph clustering, hooks routing, brain/SONA, 103 MCP tools |
| `wasm-specialist` | ruflo-wasm | WASM sandbox specialist for creating, managing, and sharing isolated agent environments |
| `witness-auditor` | ruflo-iot-cognitum | Verifies Ed25519 witness chain integrity and detects provenance gaps |
| `workflow-specialist` | ruflo-workflows | Workflow automation specialist for creating, executing, and managing multi-step processes |