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Verified every CLI flag and MCP call example in ruflo-core, cost-tracker, daa, ddd, deepseek-harness, docs, federation and goals against the published CLI (3.56.5) and the tool schemas in source: - hooks post-task has no --train-neural (8 agents/skills); neural train takes --pattern, not --pattern-type; hooks worker dispatch takes --context, not --scope (docs scoping was silently ignored). - agentdb_* examples used non-existent parameters (semantic-route query -> input; causal-edge from/to/type -> sourceId/targetId/relation; hierarchical store/recall path/data/depth -> key/value/tier and query/topK; pattern-search limit -> topK; context-synthesize sources -> maxEntries); ddd skills used a CLI-style --parent/--child form that failed on required key/value. The researcher agent now follows edges with graph-query/graph-pathfinder. - hooks_worker-status has no worker filter; cost docs now filter the result. - dossier-collect/investigator fetch web content: add untrusted-content rules and AIDefence screening. deepseek skills state the data egress. - Stale smoke/tool/command counts and four dead relative links fixed. Patch-bumps each changed plugin with a CHANGELOG entry. Co-Authored-By: RuFlo <ruv@ruv.net>